Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P23
         (771 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1151 + 24385272-24386543                                         29   4.1  
06_01_0127 - 977667-978719,978875-979051                               29   4.1  
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906...    29   5.4  
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713     29   5.4  
01_05_0251 + 19952882-19955459,19956209-19956245,19956370-199565...    29   5.4  
07_01_0230 - 1679165-1681108                                           28   7.2  
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827...    28   7.2  
10_08_0299 - 16607152-16607322,16607465-16607785,16607870-166081...    28   9.5  

>07_03_1151 + 24385272-24386543
          Length = 423

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 770 RKSLKLXEEDSDGSGQGAEPEEFQDSGE 687
           +K+ +L E D DG G+  E EE  D GE
Sbjct: 61  KKTRRLSEFDGDGDGEEVEVEEGGDGGE 88


>06_01_0127 - 977667-978719,978875-979051
          Length = 409

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 441 CTKAFPFRKFCLAEIRCKMGWRYCN 367
           C +  P+R+ CLA  +C+ G  Y N
Sbjct: 130 CARLGPYRRGCLANSQCQFGITYAN 154


>02_03_0313 -
           17590109-17590148,17590254-17590382,17590479-17590612,
           17590779-17590841,17590920-17591070,17593372-17593424,
           17593483-17593629,17593839-17594163,17594240-17594409,
           17595252-17595453,17596065-17596273,17597051-17597260,
           17597360-17597489,17599664-17600402,17600411-17600531
          Length = 940

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 326 KALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNY 222
           K + Q + P E+  R LH C C    +  D  D +
Sbjct: 293 KGMRQMYEPFENLARELHMCPCCQRAFTPDEEDEF 327


>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
          Length = 946

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = -2

Query: 749 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK---PPVNNTKKKRK 588
           EE+ +G  +GA+ EE  DSG+D    + S++ +S +S    SK   PP      KRK
Sbjct: 362 EEEEEGE-EGADEEE-NDSGDDSDSSSSSSDNSSDSSDSDDSKTVPPPTVLADLKRK 416


>01_05_0251 +
           19952882-19955459,19956209-19956245,19956370-19956586,
           19957063-19957221,19957397-19957516,19957609-19957719
          Length = 1073

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 168 ISLXVCAWIAIQYFGYGVIIVTVVN 242
           ++  +C W  + +  YGV++V  VN
Sbjct: 897 LNCLICLWYGLPFVSYGVVLVATVN 921


>07_01_0230 - 1679165-1681108
          Length = 647

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 611 SPVALIHVFC*YEMQVRSNRRPASN-LHQSPEILL 712
           SP+  ++ F  + ++V   RRP +N  H SP IL+
Sbjct: 506 SPLTDVYAFAIFVLEVTCGRRPINNYTHDSPTILV 540


>02_05_0684 - 30880527-30880753,30881952-30882124,30882687-30882754,
            30882860-30882973,30883281-30883438,30883516-30883654,
            30883851-30883907,30884064-30884140,30884324-30884462,
            30884590-30884668,30885047-30885174,30885269-30885352,
            30886072-30886191,30886274-30886375,30886470-30886617,
            30887404-30887749,30887851-30887968,30888309-30888370,
            30888798-30888947,30889049-30889169,30889269-30889319,
            30889427-30889567
          Length = 933

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 740  SDGSGQGAEPEEFQDSGEDWTP--DADSNEPASRTSRKRVSKPPVNNTKKKR 591
            +D SG  + P     SGEDW    D+ SN    R+S    ++    +++ KR
Sbjct: 853  NDSSGAESSPRTSGQSGEDWRSAFDSASNGSVDRSSSHNETRSRSADSRGKR 904


>10_08_0299 -
           16607152-16607322,16607465-16607785,16607870-16608121,
           16608298-16608435,16608544-16608651,16608814-16609014,
           16609109-16609233,16609252-16609321,16609919-16610455
          Length = 640

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 749 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNT 603
           E+D D  G  ++ +E +D GE +     SNE   R   K VS   V++T
Sbjct: 142 EDDDDDDGDDSD-DEMEDDGERYNRIPLSNEVVLRGHTKVVSALAVDHT 189


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,165,868
Number of Sequences: 37544
Number of extensions: 349643
Number of successful extensions: 1231
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)