BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_P20
(544 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 24 2.8
AY324315-1|AAQ89700.1| 153|Anopheles gambiae insulin-like pepti... 23 4.9
AY324314-1|AAQ89699.1| 153|Anopheles gambiae insulin-like pepti... 23 4.9
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 23 6.5
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 8.6
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 24.2 bits (50), Expect = 2.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 381 FVSNSLICATLGSFFLLVIFTTVVTPK 461
F+S+ + + S LL +FT + TPK
Sbjct: 758 FISDFSVTIAIFSMTLLDVFTRIATPK 784
>AY324315-1|AAQ89700.1| 153|Anopheles gambiae insulin-like peptide
7 precursor protein.
Length = 153
Score = 23.4 bits (48), Expect = 4.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 270 LQRLAYHYLHHYRLNLRKLIGKICY--TTLNTL 178
LQ L H H++ R+++ + CY TL+TL
Sbjct: 115 LQHLNTHEEHNFHRVRRQVVAECCYQSCTLDTL 147
>AY324314-1|AAQ89699.1| 153|Anopheles gambiae insulin-like peptide
7 precursor protein.
Length = 153
Score = 23.4 bits (48), Expect = 4.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 270 LQRLAYHYLHHYRLNLRKLIGKICY--TTLNTL 178
LQ L H H++ R+++ + CY TL+TL
Sbjct: 115 LQHLNTHEEHNFHRVRRQVVAECCYQSCTLDTL 147
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 23.0 bits (47), Expect = 6.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 400 IRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLF 245
I E + K +Q N + + L++ I DD + + ILNIPA + LF
Sbjct: 20 IWEQIKKKAQVNMEGQF--LVRQIYEDDITYNLIEAAVDILNIPAGDILELF 69
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 22.6 bits (46), Expect = 8.6
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = -1
Query: 277 NIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISKTYTTGESSEVLFANQEEKSLVS 98
N+ A+ SL ELEKA++ YN + + + E E L+ + E +
Sbjct: 951 NVDASYQKMSLKSLFKELEKANQHLKKYNHVNKKALDQFLSFSEQKEKLYKRKAELDVGK 1010
Query: 97 EAI 89
+ I
Sbjct: 1011 DKI 1013
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,916
Number of Sequences: 2352
Number of extensions: 7386
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -