Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P19
         (737 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0CEQ9 Cluster: Chromosome undetermined scaffold_172, w...    34   4.2  
UniRef50_Q97YF0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  

>UniRef50_A0CEQ9 Cluster: Chromosome undetermined scaffold_172,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_172,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 209

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
 Frame = -1

Query: 611 PLREIWEQ---VKERLKEVLHILYEFLKTFEVSDY-IRAYEIFIACSSNTKKQFIMELTE 444
           PL+  W+    +K+ +   +HIL   ++  +V D   R Y +   C+S T   F+ +  +
Sbjct: 23  PLKSKWQSKFYLKQLIDHYIHILQSIVRIIDVYDQGTRVYVVQEFCNSGTLFDFMKKKPQ 82

Query: 443 FIGNHLSRQI 414
           ++G+ L +++
Sbjct: 83  YMGDTLQKKV 92


>UniRef50_Q97YF0 Cluster: Putative uncharacterized protein; n=1;
           Sulfolobus solfataricus|Rep: Putative uncharacterized
           protein - Sulfolobus solfataricus
          Length = 613

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
 Frame = +1

Query: 352 GGSVSRRVLSEINQVTQKLVNICRLR*LPMNSVSSMINCFFVFELQAMKIS---YALI*S 522
           GG+++ ++ SEI  +  KLVN+ +   +   S +++++ F V    A K+    Y L+ +
Sbjct: 307 GGNITTKIESEIYSILPKLVNLIQYPSISNQSPTTIVSVFNVLNRSATKVPGVVYGLLYN 366

Query: 523 LTSKVFKNSYN 555
            T  + K+  N
Sbjct: 367 STGLISKSIMN 377


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,744,515
Number of Sequences: 1657284
Number of extensions: 10321090
Number of successful extensions: 20408
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20397
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)