Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P19
         (737 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF065861-1|AAC70016.1|  216|Homo sapiens olfactory receptor prot...    33   1.1  
AF065860-1|AAC70015.1|  216|Homo sapiens olfactory receptor prot...    33   1.1  
AL162417-12|CAI13417.1|  859|Homo sapiens ral guanine nucleotide...    31   4.3  
AL162417-11|CAI13415.1|  914|Homo sapiens ral guanine nucleotide...    31   4.3  
AF295773-1|AAG02122.1|  914|Homo sapiens ral guanine nucleotide ...    31   4.3  
AF027169-1|AAQ13414.1|  859|Homo sapiens Ral guanine nucleotide ...    31   4.3  

>AF065861-1|AAC70016.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 484 LQAMKISYALI*SLTSKVFKNSYNICRTSFNRSFTCSH 597
           L A   S++L+ SLT   F  + + CRT+F  +F C H
Sbjct: 77  LVAASYSWSLVCSLTYTYFLLTLSFCRTNFINNFVCEH 114


>AF065860-1|AAC70015.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 484 LQAMKISYALI*SLTSKVFKNSYNICRTSFNRSFTCSH 597
           L A   S++L+ SLT   F  + + CRT+F  +F C H
Sbjct: 77  LVAASYSWSLVCSLTYTYFLLTLSFCRTNFINNFVCEH 114


>AL162417-12|CAI13417.1|  859|Homo sapiens ral guanine nucleotide
           dissociation stimulator protein.
          Length = 859

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 19/86 (22%), Positives = 35/86 (40%)
 Frame = +1

Query: 346 HRGGSVSRRVLSEINQVTQKLVNICRLR*LPMNSVSSMINCFFVFELQAMKISYALI*SL 525
           H GG+  +R L   N+    L   C++R +   ++  ++    V   Q   +SY  I   
Sbjct: 32  HHGGNKGQRWLGYENESALNLYETCKVRTVKAGTLEKLVE-HLVPAFQGSDLSYVTIFLC 90

Query: 526 TSKVFKNSYNICRTSFNRSFTCSHIS 603
           T + F  +  +    F R   C  ++
Sbjct: 91  TYRAFTTTQQVLDLLFKRYGRCDALT 116


>AL162417-11|CAI13415.1|  914|Homo sapiens ral guanine nucleotide
           dissociation stimulator protein.
          Length = 914

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 19/86 (22%), Positives = 35/86 (40%)
 Frame = +1

Query: 346 HRGGSVSRRVLSEINQVTQKLVNICRLR*LPMNSVSSMINCFFVFELQAMKISYALI*SL 525
           H GG+  +R L   N+    L   C++R +   ++  ++    V   Q   +SY  I   
Sbjct: 87  HHGGNKGQRWLGYENESALNLYETCKVRTVKAGTLEKLVE-HLVPAFQGSDLSYVTIFLC 145

Query: 526 TSKVFKNSYNICRTSFNRSFTCSHIS 603
           T + F  +  +    F R   C  ++
Sbjct: 146 TYRAFTTTQQVLDLLFKRYGRCDALT 171


>AF295773-1|AAG02122.1|  914|Homo sapiens ral guanine nucleotide
           dissociation stimulator protein.
          Length = 914

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 19/86 (22%), Positives = 35/86 (40%)
 Frame = +1

Query: 346 HRGGSVSRRVLSEINQVTQKLVNICRLR*LPMNSVSSMINCFFVFELQAMKISYALI*SL 525
           H GG+  +R L   N+    L   C++R +   ++  ++    V   Q   +SY  I   
Sbjct: 87  HHGGNKGQRWLGYENESALNLYETCKVRTVKAGTLEKLVE-HLVPAFQGSDLSYVTIFLC 145

Query: 526 TSKVFKNSYNICRTSFNRSFTCSHIS 603
           T + F  +  +    F R   C  ++
Sbjct: 146 TYRAFTTTQQVLDLLFKRYGRCDALT 171


>AF027169-1|AAQ13414.1|  859|Homo sapiens Ral guanine nucleotide
           dissociation stimulator A protein.
          Length = 859

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 19/86 (22%), Positives = 35/86 (40%)
 Frame = +1

Query: 346 HRGGSVSRRVLSEINQVTQKLVNICRLR*LPMNSVSSMINCFFVFELQAMKISYALI*SL 525
           H GG+  +R L   N+    L   C++R +   ++  ++    V   Q   +SY  I   
Sbjct: 32  HHGGNKGQRWLGYENESALNLYETCKVRTVKAGTLEKLVE-HLVPAFQGSDLSYVTIFLC 90

Query: 526 TSKVFKNSYNICRTSFNRSFTCSHIS 603
           T + F  +  +    F R   C  ++
Sbjct: 91  TYRAFTTTQQVLDLLFKRYGRCDALT 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,517,940
Number of Sequences: 237096
Number of extensions: 1479691
Number of successful extensions: 2101
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2101
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)