Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_P18
(414 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35 pro... 120 3e-27
CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein. 120 3e-27
BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35 p... 120 3e-27
BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35 p... 120 3e-27
BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein. 120 3e-27
BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35 p... 120 3e-27
AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35 p... 120 3e-27
AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35 p... 69 8e-12
AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35 p... 53 4e-07
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 30 3.5
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 30 3.5
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 30 3.5
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 30 3.5
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 30 3.5
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 30 3.5
BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein. 29 6.1
BC015395-1|AAH15395.1| 255|Homo sapiens LOC130940 protein protein. 29 6.1
AK058105-1|BAB71668.1| 255|Homo sapiens protein ( Homo sapiens ... 29 6.1
AF458588-1|AAM49716.1| 591|Homo sapiens unknown protein. 29 6.1
AC019044-1|AAX88983.1| 361|Homo sapiens unknown protein. 29 6.1
BX538345-1|CAD98108.1| 1582|Homo sapiens hypothetical protein pr... 29 8.1
BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclea... 29 8.1
BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclea... 29 8.1
AK131549-1|BAD18683.1| 959|Homo sapiens protein ( Homo sapiens ... 29 8.1
AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens ... 29 8.1
>U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 120 bits (288), Expect = 3e-27
Identities = 63/113 (55%), Positives = 74/113 (65%)
Frame = -3
Query: 364 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 185
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 184 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNL 26
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +K +++ R+ L
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERL 113
>CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein.
Length = 123
Score = 120 bits (288), Expect = 3e-27
Identities = 63/113 (55%), Positives = 74/113 (65%)
Frame = -3
Query: 364 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 185
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 184 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNL 26
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +K +++ R+ L
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERL 113
>BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 120 bits (288), Expect = 3e-27
Identities = 63/113 (55%), Positives = 74/113 (65%)
Frame = -3
Query: 364 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 185
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 184 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNL 26
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +K +++ R+ L
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERL 113
>BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 120 bits (288), Expect = 3e-27
Identities = 63/113 (55%), Positives = 74/113 (65%)
Frame = -3
Query: 364 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 185
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 184 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNL 26
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +K +++ R+ L
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERL 113
>BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein.
Length = 123
Score = 120 bits (288), Expect = 3e-27
Identities = 63/113 (55%), Positives = 74/113 (65%)
Frame = -3
Query: 364 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 185
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 184 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNL 26
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +K +++ R+ L
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERL 113
>BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 120 bits (288), Expect = 3e-27
Identities = 63/113 (55%), Positives = 74/113 (65%)
Frame = -3
Query: 364 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 185
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 184 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNL 26
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +K +++ R+ L
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERL 113
>AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 120 bits (288), Expect = 3e-27
Identities = 63/113 (55%), Positives = 74/113 (65%)
Frame = -3
Query: 364 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 185
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 184 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNL 26
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +K +++ R+ L
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERL 113
>AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35
protein.
Length = 95
Score = 68.5 bits (160), Expect = 8e-12
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -3
Query: 358 KVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 179
K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V +
Sbjct: 2 KIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVIN 61
Query: 178 QKMKVNLRNHYK 143
Q K NLR YK
Sbjct: 62 QTQKENLRKFYK 73
>AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35
protein.
Length = 33
Score = 52.8 bits (121), Expect = 4e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -3
Query: 274 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 176
LRVAKVTGG ASKLSKIRVVRK+IARV V +Q
Sbjct: 1 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 145 KNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNLSS 20
++KK K D +++R R+ T + K K +E+DRER S
Sbjct: 373 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSES 414
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 145 KNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNLSS 20
++KK K D +++R R+ T + K K +E+DRER S
Sbjct: 221 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSES 262
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 145 KNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNLSS 20
++KK K D +++R R+ T + K K +E+DRER S
Sbjct: 373 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSES 414
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 145 KNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNLSS 20
++KK K D +++R R+ T + K K +E+DRER S
Sbjct: 313 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSES 354
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 145 KNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNLSS 20
++KK K D +++R R+ T + K K +E+DRER S
Sbjct: 373 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSES 414
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 145 KNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDRERNLSS 20
++KK K D +++R R+ T + K K +E+DRER S
Sbjct: 373 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSES 414
>BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein.
Length = 417
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 163 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIK 56
+++N +N KYKP+D + + K L AK+K
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLK 49
>BC015395-1|AAH15395.1| 255|Homo sapiens LOC130940 protein protein.
Length = 255
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 163 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIK 56
+++N +N KYKP+D + + K L AK+K
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLK 49
>AK058105-1|BAB71668.1| 255|Homo sapiens protein ( Homo sapiens
cDNA FLJ25376 fis, clone TST02010. ).
Length = 255
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 163 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIK 56
+++N +N KYKP+D + + K L AK+K
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLK 49
>AF458588-1|AAM49716.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 163 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIK 56
+++N +N KYKP+D + + K L AK+K
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLK 49
>AC019044-1|AAX88983.1| 361|Homo sapiens unknown protein.
Length = 361
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 163 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIK 56
+++N +N KYKP+D + + K L AK+K
Sbjct: 5 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLK 40
>BX538345-1|CAD98108.1| 1582|Homo sapiens hypothetical protein
protein.
Length = 1582
Score = 28.7 bits (61), Expect = 8.1
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = -3
Query: 238 KLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRK---ALTKHE 68
K SK+ +R+A+A+ + ++ ++ +K + DL A++ R R+ +HE
Sbjct: 684 KKSKVSTLRQALAKRL----SPKRFGAKSSWRPEKLELSDLEARRQRRQRRWEDIFNQHE 739
Query: 67 AKIKXEERDRERNLSSHLE 11
+++ ++D+E S + E
Sbjct: 740 EELRQVDKDKEDESSDNDE 758
>BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 28.7 bits (61), Expect = 8.1
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -3
Query: 223 RVVRKAIARVYI--VYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXE 50
RV RK R+ + M+ ++ +NK+ K L L+ ++ AM A KHE+ +
Sbjct: 50 RVQRKQFLRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEK 109
Query: 49 ERDRERNLSSHLESM 5
R + R S L +
Sbjct: 110 MRQQVRENSIELREL 124
>BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 28.7 bits (61), Expect = 8.1
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -3
Query: 223 RVVRKAIARVYI--VYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXE 50
RV RK R+ + M+ ++ +NK+ K L L+ ++ AM A KHE+ +
Sbjct: 50 RVQRKQFLRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEK 109
Query: 49 ERDRERNLSSHLESM 5
R + R S L +
Sbjct: 110 MRQQVRENSIELREL 124
>AK131549-1|BAD18683.1| 959|Homo sapiens protein ( Homo sapiens
cDNA FLJ16788 fis, clone PLACE7013963, weakly similar
to Mus musculus Nik related kinase (Nrk). ).
Length = 959
Score = 28.7 bits (61), Expect = 8.1
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = -3
Query: 238 KLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRK---ALTKHE 68
K SK+ +R+A+A+ + ++ ++ +K + DL A++ R R+ +HE
Sbjct: 352 KKSKVSTLRQALAKRL----SPKRFRAKSSWRPEKLELSDLEARRQRRQRRWEDIFNQHE 407
Query: 67 AKIKXEERDRERNLSSHLE 11
+++ ++D+E S + E
Sbjct: 408 EELRQVDKDKEDESSDNDE 426
>AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ11222 fis, clone PLACE1008177. ).
Length = 495
Score = 28.7 bits (61), Expect = 8.1
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -3
Query: 223 RVVRKAIARVYI--VYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXE 50
RV RK R+ + M+ ++ +NK+ K L L+ ++ AM A KHE+ +
Sbjct: 50 RVQRKQFLRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEK 109
Query: 49 ERDRERNLSSHLESM 5
R + R S L +
Sbjct: 110 MRQQVRENSIELREL 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,006,097
Number of Sequences: 237096
Number of extensions: 701577
Number of successful extensions: 1798
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1794
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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