Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P15
         (710 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9G860 Cluster: NADH dehydrogenase subunit 2; n=1; Mala...    38   0.32 
UniRef50_Q7PDR1 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=...    35   2.3  
UniRef50_Q8I1Z0 Cluster: Putative uncharacterized protein PFD019...    33   9.2  

>UniRef50_Q9G860 Cluster: NADH dehydrogenase subunit 2; n=1;
           Malawimonas jakobiformis|Rep: NADH dehydrogenase subunit
           2 - Malawimonas jakobiformis
          Length = 494

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
 Frame = -2

Query: 706 LYREITVIVFLFHKIEFLILFQCIFLXQHTITNH**FKYNKISSNNLKVMKRI*M*TNVN 527
           L++ I   +FLF  +  LIL+  I      I  +       I  NNL ++    +  ++ 
Sbjct: 8   LFKTIPTEIFLFISVSILILYGIINTTSLLINRY-------IILNNLNILVIFTLLISIL 60

Query: 526 LIYSKNLFFKN---KNYYFSSRYYNL*SVLCIIDYHRNS*IINL-WVSSEPLSSFDFNIL 359
           LIY +N F  N    N + +  + N+  ++ +I    +S II+L ++ +  ++SF+++IL
Sbjct: 61  LIY-QNPFVNNVTFNNTFINDNFINIIKIIVLIS-SISSIIISLNYLKNNKINSFEYSIL 118

Query: 358 TLF 350
            LF
Sbjct: 119 ILF 121


>UniRef50_Q7PDR1 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=2;
           Plasmodium (Vinckeia)|Rep: ERYTHROCYTE MEMBRANE PROTEIN
           PFEMP3 - Plasmodium yoelii yoelii
          Length = 1336

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
 Frame = -2

Query: 505 FFKNKNYYFSSRYYNL*SVLCIIDYHRNS*IINLWVSSEPLSSFDFNILTLFRLEHGHYK 326
           F +  +Y++   Y      L   D+  +  I N ++       F+F +   F++++    
Sbjct: 638 FIQYNSYFWYILYKQYDMFLSYYDHKNHCQIFNAFLFHFLNYVFNFPMDNFFKIDNKLSN 697

Query: 325 HSN-------QRSLFHHGDSDVYYARVIKSLLIEEKGLMMNYYYS 212
            ++       ++ LF   D D+Y  ++I S L++++    NYYYS
Sbjct: 698 QNDLLVKGIFKKCLFLENDRDIYLFKIIFSFLLQDQNHFYNYYYS 742


>UniRef50_Q8I1Z0 Cluster: Putative uncharacterized protein PFD0190w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFD0190w - Plasmodium falciparum
           (isolate 3D7)
          Length = 1186

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -2

Query: 391 EPLSSFDFNILTLFRLEHGHYKHSNQRSLFHHGDS-DVYYARVIKSLLIEEK 239
           +P+ +F  N+      E+  + HS+   ++HH DS D Y  +++K+++ +EK
Sbjct: 558 DPIHTFK-NMFCKSEKENLDFNHSDMFHIYHHNDSMDKYVNKILKNIMNKEK 608


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,240,782
Number of Sequences: 1657284
Number of extensions: 10209480
Number of successful extensions: 20300
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20280
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)