Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P15
         (710 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   2.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   2.9  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   2.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.6  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 364 ILTLFRLEHGHYKHSN 317
           ILTL + E  HY+H N
Sbjct: 270 ILTLGKKEFSHYEHQN 285


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 562 LLDCYLKFYCI*IISG*LWYVVVKICIEIKSR 657
           +L C+   Y I I++  L+Y++V + I++  R
Sbjct: 106 VLSCWTNIYYIIILAWALFYLLVSLRIDLPWR 137


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 562 LLDCYLKFYCI*IISG*LWYVVVKICIEIKSR 657
           +L C+   Y I I++  L+Y++V + I++  R
Sbjct: 159 VLSCWTNIYYIIILAWALFYLLVSLRIDLPWR 190


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 17/69 (24%), Positives = 34/69 (49%)
 Frame = -2

Query: 343 EHGHYKHSNQRSLFHHGDSDVYYARVIKSLLIEEKGLMMNYYYSVLT*CMAMSNKCVVNV 164
           ++G+  H+NQR+++     ++ Y R   + L     + +N  +SVL   + +  +  V  
Sbjct: 663 KYGYVSHANQRNMYKLDLKNMKYTR--SADLSSYNCVPINVQFSVLYGFVIIECQEPVTN 720

Query: 163 RKVWLLILD 137
           R    L+LD
Sbjct: 721 RPTGQLLLD 729


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 368 QYSNII*IRTWSLQTQQSKISLPPWRF*CLLRP 270
           +Y   I +   S   + + I  PP RF C +RP
Sbjct: 109 KYCGNITLNIESTSNKMTVILTPPGRFFCEVRP 141


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,811
Number of Sequences: 438
Number of extensions: 3288
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)