Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P14
         (817 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   3.7  
AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse t...    24   4.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   6.4  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.5  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 497 NFRQSVDDSISIGNSIIAYV 438
           NF+Q +DD ++ GN ++  V
Sbjct: 856 NFKQHIDDVVARGNQLLGVV 875


>AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 129

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -1

Query: 343 NTIAIVC-AYVS-QDHAFFYYRSYTTNII 263
           N++   C +Y+S   H FF  RS TTN++
Sbjct: 21  NSLMYHCRSYISTHQHGFFPRRSVTTNLV 49


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +2

Query: 182  GHHCDIKCTPPYYRFKIQSLQYC 250
            G  CD KC P YY F       C
Sbjct: 966  GKKCD-KCAPAYYGFSEDGCHAC 987


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 569 FSTTTKLYALPVELCQRWNL 510
           F   TKL+AL +E C+  NL
Sbjct: 93  FKQLTKLHALSIEYCKIANL 112


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,618
Number of Sequences: 2352
Number of extensions: 14493
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)