Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P11
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2511|AAF48688.1| 1048|Drosophila melanogaster CG9059-PB...    29   7.8  
AE014298-2510|AAN09430.2| 1077|Drosophila melanogaster CG9059-PA...    29   7.8  

>AE014298-2511|AAF48688.1| 1048|Drosophila melanogaster CG9059-PB,
           isoform B protein.
          Length = 1048

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 265 VPQSHDFSLNYYSGFHCISYMFL*LS*NKRKTPGLDYWKPEDIPLEEASDSSENSSLVTS 444
           +PQS  FS+    GFH    +FL         PG+   +    PL    D+S  S LVT 
Sbjct: 683 IPQSRTFSVEIRHGFHAQVRLFL--------PPGMREEEDVAFPLVLHVDASPGSQLVTE 734

Query: 445 -FSVD 456
            F VD
Sbjct: 735 RFHVD 739


>AE014298-2510|AAN09430.2| 1077|Drosophila melanogaster CG9059-PA,
           isoform A protein.
          Length = 1077

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 265 VPQSHDFSLNYYSGFHCISYMFL*LS*NKRKTPGLDYWKPEDIPLEEASDSSENSSLVTS 444
           +PQS  FS+    GFH    +FL         PG+   +    PL    D+S  S LVT 
Sbjct: 712 IPQSRTFSVEIRHGFHAQVRLFL--------PPGMREEEDVAFPLVLHVDASPGSQLVTE 763

Query: 445 -FSVD 456
            F VD
Sbjct: 764 RFHVD 768


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,157,109
Number of Sequences: 53049
Number of extensions: 411945
Number of successful extensions: 1016
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)