Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P09
         (314 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81900-1|CAA57489.1|   70|Homo sapiens NADH oxidoreductase subun...    40   0.001
U54993-1|AAD00084.1|   70|Homo sapiens mitochondrial complex I h...    40   0.001
CR456889-1|CAG33170.1|   70|Homo sapiens ZNF183 protein.               40   0.001
BC000266-1|AAH00266.1|   70|Homo sapiens NADH dehydrogenase (ubi...    40   0.001
M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.          27   8.8  
AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.          27   8.8  
AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein pro...    27   8.8  

>X81900-1|CAA57489.1|   70|Homo sapiens NADH oxidoreductase subunit
           MWFE protein.
          Length = 70

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 232 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG 65
           MW+EILP   ++   + +PG    +IH  T G   +R     +  +L +RD R++G
Sbjct: 1   MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISG 56


>U54993-1|AAD00084.1|   70|Homo sapiens mitochondrial complex I
           hMWFE subunit protein.
          Length = 70

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 232 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG 65
           MW+EILP   ++   + +PG    +IH  T G   +R     +  +L +RD R++G
Sbjct: 1   MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISG 56


>CR456889-1|CAG33170.1|   70|Homo sapiens ZNF183 protein.
          Length = 70

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 232 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG 65
           MW+EILP   ++   + +PG    +IH  T G   +R     +  +L +RD R++G
Sbjct: 1   MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISG 56


>BC000266-1|AAH00266.1|   70|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa protein.
          Length = 70

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 232 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG 65
           MW+EILP   ++   + +PG    +IH  T G   +R     +  +L +RD R++G
Sbjct: 1   MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISG 56


>M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.
          Length = 2871

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 163 YHIHNLTLGNHYRR--SLTDRWSRALYQRDMRLTGNPYEVNGLGSY 32
           Y +++L LG    +   LTDRW R   Q D RL     ++  L +Y
Sbjct: 846 YPLYDLDLGKFGEKVTQLTDRWQRIDKQIDFRLWDLEKQIKQLRNY 891


>AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.
          Length = 2871

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 163 YHIHNLTLGNHYRR--SLTDRWSRALYQRDMRLTGNPYEVNGLGSY 32
           Y +++L LG    +   LTDRW R   Q D RL     ++  L +Y
Sbjct: 846 YPLYDLDLGKFGEKVTQLTDRWQRIDKQIDFRLWDLEKQIKQLRNY 891


>AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein protein.
          Length = 2319

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 163  YHIHNLTLGNHYRR--SLTDRWSRALYQRDMRLTGNPYEVNGLGSY 32
            Y +++L LG    +   LTDRW R   Q D RL     ++  L +Y
Sbjct: 893  YPLYDLDLGKFGEKVTQLTDRWQRIDKQIDFRLWDLEKQIKQLRNY 938


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,440,751
Number of Sequences: 237096
Number of extensions: 743605
Number of successful extensions: 1423
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)