Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P07
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D557BF Cluster: PREDICTED: similar to chromosome...    40   0.039
UniRef50_Q96X98 Cluster: Putative uncharacterized protein ST2614...    33   4.5  
UniRef50_P04540 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    33   4.5  

>UniRef50_UPI0000D557BF Cluster: PREDICTED: similar to chromosome 6
           open reading frame 106 isoform a; n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to chromosome 6 open
           reading frame 106 isoform a - Tribolium castaneum
          Length = 241

 Score = 40.3 bits (90), Expect = 0.039
 Identities = 18/37 (48%), Positives = 25/37 (67%)
 Frame = -2

Query: 651 SFFHLVTDKGXQIGDTLWVEVTVESEMTMALVEQLAA 541
           S + L T+KG   GD +WV +TV  E TMAL +QL++
Sbjct: 165 SEWRLCTEKGAYFGDPMWVIITVVEEGTMALTQQLSS 201


>UniRef50_Q96X98 Cluster: Putative uncharacterized protein ST2614;
           n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
           protein ST2614 - Sulfolobus tokodaii
          Length = 275

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 117 FSKLXNFNNXXQICXFINIIFYS*NYSTFCFV*TDFIENTNI 242
           F K+ N N    I  FI +IFYS  +S F  +   ++ NT+I
Sbjct: 117 FIKILNINKEASIIGFIGVIFYSIGHSLFILI--PYLNNTHI 156


>UniRef50_P04540 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=4; Trypanosomatidae|Rep: NADH-ubiquinone
           oxidoreductase chain 5 - Trypanosoma brucei brucei
          Length = 590

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
 Frame = -2

Query: 432 YHYLTIITNNFYPNLL-YRFYLQFFGS*LGRYL--NWLSIVCYNFKI----YLVAFYSIE 274
           Y ++ ++ N  +  ++ Y FY  +F   LGR+L   W+ +VC N  I    +L A+   E
Sbjct: 82  YMFIMLLINMVFCFIVFYAFYYMYFDMLLGRFLIIFWIFVVCMNLFILSYDFLTAYCGWE 141

Query: 273 LHMQCFLFLMKYLY 232
           L      FL+ Y +
Sbjct: 142 LLGLFSFFLISYFW 155


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,693,982
Number of Sequences: 1657284
Number of extensions: 8077455
Number of successful extensions: 16260
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16237
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)