Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P01
         (709 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9PPS6 Cluster: Unique hypothetical membrane lipoprotei...    34   3.9  
UniRef50_Q225K5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_A3C0S5 Cluster: Putative uncharacterized protein; n=3; ...    33   6.9  
UniRef50_Q4Z3C9 Cluster: Putative uncharacterized protein; n=2; ...    33   6.9  
UniRef50_UPI00006CC46F Cluster: hypothetical protein TTHERM_0013...    33   9.1  

>UniRef50_Q9PPS6 Cluster: Unique hypothetical membrane lipoprotein;
           n=1; Ureaplasma parvum|Rep: Unique hypothetical membrane
           lipoprotein - Ureaplasma parvum (Ureaplasma urealyticum
           biotype 1)
          Length = 397

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
 Frame = +2

Query: 98  TCSEKK-KNSGLNNRTQLQLRSCVVNKNLKMIWMKIVLQFSNSSKLKVRINHKCNIFKHY 274
           +CS KK K   +N  TQ++ +S + N N+ +   K +L  S + + K+ +N        Y
Sbjct: 30  SCSTKKSKKVTINQDTQIKFQS-ITNNNINLANEKQILNQSQNKETKIFLN-------LY 81

Query: 275 YSTKDWCSLSIKN----MYSFSFPIKILVNYK 358
            S KD+   +IK      YS++F +  L N K
Sbjct: 82  ESLKDYFDQTIKRSLYLYYSYNFALLNLYNAK 113


>UniRef50_Q225K5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 226

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +2

Query: 233 KVRINHKCNIFKHYYSTKDWCSLSIKNMYSFSFPIKILVN 352
           +V +N  CNI+   YST++ C+  I+ +  F  P+++ +N
Sbjct: 62  QVELNVSCNIYPPNYSTEEQCA-DIQKIVDFQSPVEVYIN 100


>UniRef50_A3C0S5 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 769

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = +2

Query: 128 LNNRTQLQLRSCVVNKNLKMIWMKIVLQFSNSSKLKVRINH-KCNIFKHYYSTKDWCSLS 304
           LNN TQ++  SC++  +L+ I + ++L+ +     +   NH K  I+  + + K WC+  
Sbjct: 558 LNNGTQVEKYSCLIIADLEFIVLLLLLKCNEIGSSE---NHTKGGIWGFFEAIKAWCAKM 614

Query: 305 IKNMYSFSFPIKILVNYKNLIIP 373
              + +F F +  L++ K L  P
Sbjct: 615 WHMLINF-FTVLWLLHRKGLFDP 636


>UniRef50_Q4Z3C9 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 87

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +2

Query: 257 NIFKHYYSTKDWCSLSIKNMYSFSFPIKILVNYKNLIIPN 376
           ++F++   TK+   L IK+ Y+ SF  K++ N+KN +  N
Sbjct: 20  HLFRYKLKTKELKKLYIKSCYNLSFNCKVIRNFKNSLQAN 59


>UniRef50_UPI00006CC46F Cluster: hypothetical protein TTHERM_00137670;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00137670 - Tetrahymena thermophila SB210
          Length = 1026

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 20/70 (28%), Positives = 38/70 (54%)
 Frame = +2

Query: 110  KKKNSGLNNRTQLQLRSCVVNKNLKMIWMKIVLQFSNSSKLKVRINHKCNIFKHYYSTKD 289
            KK+N+G +++ QL +R+  +NK+  +   +I L    +S+++     + NIF H Y    
Sbjct: 919  KKQNTGKSSKKQLYVRTDQINKSYDLQQKQIELAVIKNSQIQ-----QANIFSHKYIESI 973

Query: 290  WCSLSIKNMY 319
              + S+K  Y
Sbjct: 974  EVAQSLKFFY 983


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,183,295
Number of Sequences: 1657284
Number of extensions: 9353819
Number of successful extensions: 20158
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20151
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)