Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P01
         (709 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0123 + 18210069-18213737                                         31   0.68 
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412...    30   2.1  
05_01_0583 - 5222187-5222291,5222345-5222417,5222516-5222587,522...    29   3.6  
11_06_0052 - 19652594-19652703,19653406-19653586,19653659-196537...    28   8.4  

>05_04_0123 + 18210069-18213737
          Length = 1222

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 206  AQFSSKSFSDSY*PHNFS-IEVEFCYSSLSFFSFRNK*LFVLNCNV 72
            AQ S KSF D    HN   IE+EFCY+ ++F +  +  L + +CNV
Sbjct: 1056 AQVSVKSFEDEG-MHNLERIEIEFCYNLVAFPTSLSY-LRICSCNV 1099


>09_06_0016 -
           20240358-20240797,20241040-20241131,20241132-20241250,
           20241398-20241561,20241664-20241757,20242048-20242080,
           20242361-20242478,20242712-20242812,20242882-20242962,
           20243138-20243335,20243411-20243545,20243662-20243667,
           20243727-20243805,20243845-20243896,20244328-20244388,
           20244475-20244532,20245137-20245225,20246305-20246799
          Length = 804

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +2

Query: 128 LNNRTQLQLRSCVVNKNLKMIWMKIVLQFSNSSKLKVRINH-KCNIFKHYYSTKDWCS 298
           LNN TQ++  SC++  +L+ I + ++L+ +     +   NH K  I+  + + K WC+
Sbjct: 558 LNNGTQVEKYSCLIIADLEFIVLLLLLKCNEIGSSE---NHTKGGIWGFFEAIKAWCA 612


>05_01_0583 -
           5222187-5222291,5222345-5222417,5222516-5222587,
           5222831-5222899,5223014-5223144,5223884-5223886
          Length = 150

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 663 KLTNFHVRSSLKRKSKFQHCYIAKIL-YLEILKISKVNR 550
           K+   H     K +S FQHCY+AK L YL  L + ++ R
Sbjct: 99  KMKREHATLKQKLESYFQHCYMAKQLGYLLFLLLMQLLR 137


>11_06_0052 -
           19652594-19652703,19653406-19653586,19653659-19653717,
           19653873-19654022,19654719-19654827,19654879-19654933,
           19654985-19654989,19656837-19656958,19657181-19657241
          Length = 283

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 86  EQTITCSEKKKNSGLNNRTQLQLRSCVVNKNLK 184
           EQT     +  N  + +  Q +LR+C+VNK LK
Sbjct: 55  EQTAAKQTRTANLLIAHDIQFELRNCMVNKELK 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,964,380
Number of Sequences: 37544
Number of extensions: 202174
Number of successful extensions: 300
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)