Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_O21
         (645 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U69108-1|AAC51329.1|  538|Homo sapiens TNF receptor associated f...    30   6.1  
CR536557-1|CAG38794.1|  557|Homo sapiens TRAF5 protein.                30   6.1  
BC032830-1|AAH32830.1|  149|Homo sapiens TRAF5 protein protein.        30   6.1  
BC029600-1|AAH29600.1|  557|Homo sapiens TNF receptor-associated...    30   6.1  
AL590101-3|CAH72434.1|  557|Homo sapiens TNF receptor-associated...    30   6.1  
AB000509-1|BAA25262.1|  557|Homo sapiens TRAF5 protein.                30   6.1  

>U69108-1|AAC51329.1|  538|Homo sapiens TNF receptor associated
           factor 5 protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2

Query: 164 NICKRNILNLYLYC 205
           N CKR +LNLY+YC
Sbjct: 78  NCCKREVLNLYVYC 91


>CR536557-1|CAG38794.1|  557|Homo sapiens TRAF5 protein.
          Length = 557

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2

Query: 164 NICKRNILNLYLYC 205
           N CKR +LNLY+YC
Sbjct: 97  NCCKREVLNLYVYC 110


>BC032830-1|AAH32830.1|  149|Homo sapiens TRAF5 protein protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2

Query: 164 NICKRNILNLYLYC 205
           N CKR +LNLY+YC
Sbjct: 97  NCCKREVLNLYVYC 110


>BC029600-1|AAH29600.1|  557|Homo sapiens TNF receptor-associated
           factor 5 protein.
          Length = 557

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2

Query: 164 NICKRNILNLYLYC 205
           N CKR +LNLY+YC
Sbjct: 97  NCCKREVLNLYVYC 110


>AL590101-3|CAH72434.1|  557|Homo sapiens TNF receptor-associated
           factor 5 protein.
          Length = 557

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2

Query: 164 NICKRNILNLYLYC 205
           N CKR +LNLY+YC
Sbjct: 97  NCCKREVLNLYVYC 110


>AB000509-1|BAA25262.1|  557|Homo sapiens TRAF5 protein.
          Length = 557

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2

Query: 164 NICKRNILNLYLYC 205
           N CKR +LNLY+YC
Sbjct: 97  NCCKREVLNLYVYC 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,530,144
Number of Sequences: 237096
Number of extensions: 1304517
Number of successful extensions: 2040
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2040
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)