Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_O20
         (444 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X77748-1|CAA54796.1|  877|Homo sapiens metabotropic glutamate re...    32   1.0  
BC041407-1|AAH41407.1|  879|Homo sapiens glutamate receptor, met...    32   1.0  
AC002081-1|AAC60379.2|  437|Homo sapiens unknown protein.              29   7.2  
BC022496-1|AAH22496.2|  879|Homo sapiens glutamate receptor, met...    29   9.6  
AF243424-1|AAF81201.1|  678|Homo sapiens SG2NA beta isoform prot...    29   9.6  

>X77748-1|CAA54796.1|  877|Homo sapiens metabotropic glutamate
           receptor type 3 (mGluR3) protein.
          Length = 877

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 375 LALAHSAPQGPKDDNVQLLKFDSDNDGLGSYRFLYEQTDGSK 250
           L +  +AP  P  D   ++KFD+  DG+G Y     Q  G K
Sbjct: 434 LKINFTAPFNPNKDADSIVKFDTFGDGMGRYNVFNFQNVGGK 475


>BC041407-1|AAH41407.1|  879|Homo sapiens glutamate receptor,
           metabotropic 3 protein.
          Length = 879

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 375 LALAHSAPQGPKDDNVQLLKFDSDNDGLGSYRFLYEQTDGSK 250
           L +  +AP  P  D   ++KFD+  DG+G Y     Q  G K
Sbjct: 436 LKINFTAPFNPNKDADSIVKFDTFGDGMGRYNVFNFQNVGGK 477


>AC002081-1|AAC60379.2|  437|Homo sapiens unknown protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 354 PQGPKDDNVQLLKFDSDNDGLGSYRFLYEQTDGSK 250
           P  P  D   ++KFD+  DG+G Y     Q  G K
Sbjct: 1   PFNPNKDADSIVKFDTFGDGMGRYNVFNFQNVGGK 35


>BC022496-1|AAH22496.2|  879|Homo sapiens glutamate receptor,
           metabotropic 3 protein.
          Length = 879

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 375 LALAHSAPQGPKDDNVQLLKFDSDNDGLGSYRFLYEQTDGSK 250
           L +  +AP     D   ++KFD+  DG+G Y     Q  G K
Sbjct: 436 LKINFTAPFNTNKDADSIVKFDTFGDGMGRYNVFNFQNVGGK 477


>AF243424-1|AAF81201.1|  678|Homo sapiens SG2NA beta isoform
           protein.
          Length = 678

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
 Frame = -1

Query: 351 QGPKDDNVQLLKFDSDNDGLGSYRFLYEQTDGSKRDEQGEVINVGTDDESIVIKGSYSWV 172
           + PK    ++ +  S  D L ++ FL E  D S  DE+ ++I  G  +     + +   +
Sbjct: 109 ESPKQKGQEIKR--SSGDVLETFNFL-ENADDSDEDEENDMIE-GIPEGKDKHRMNKHKI 164

Query: 171 APDGITYTVTYVADDK------GFQPSIEQGPGGAIPSSSNSXACWIKNDLS 34
             +G+   +T   D +       F  + E G G     SS     W K+DLS
Sbjct: 165 GNEGLAADLTDDPDTEEALKEFDFLVTAEDGEGAGEARSSGDGTEWDKDDLS 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,732,752
Number of Sequences: 237096
Number of extensions: 1319999
Number of successful extensions: 3041
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3041
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)