Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_O11
(646 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 31 0.007
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.051
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 28 0.089
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 24 1.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 1.9
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 3.3
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 3.3
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 3.3
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 3.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 4.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.8
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 5.8
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 5.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 7.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.7
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 31.5 bits (68), Expect = 0.007
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 644 LAPYRDYSFRLRACFXSSCSRSTKSIVRTLRAFNHVDVPRETVATIKDSR-IVVSWKPPE 468
L Y +YS ++ A F S + + + + P A + S I+VSW+PP
Sbjct: 1146 LKKYTNYSMQVLA-FTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSSESILVSWRPPS 1204
Query: 467 ITNGPILAYTV 435
NG I YTV
Sbjct: 1205 QPNGVITQYTV 1215
Score = 22.6 bits (46), Expect = 3.3
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -3
Query: 536 DVPRETVATIKDSRIV-VSWKPPEITNGPILAYTVE 432
+VP K R V +SW P N PI Y +E
Sbjct: 877 EVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIE 912
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = -3
Query: 530 PRETVATIKDSRIVVSWKPPEITNGPILAYTVELLPK 420
P+ T+ + + + +P N PI YT+ P+
Sbjct: 1370 PQITLTATTTNSLTMKVRPHPTDNAPIHGYTIHYKPE 1406
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 28.7 bits (61), Expect = 0.051
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -3
Query: 488 VSWKPPEITNGPILAYTVELLPKIEQTSYLIPQSWCVMGNITSFEIVSLVASTNKVRV 315
V WKPP I VE P EQT ++ SW G ++ +N++ V
Sbjct: 133 VVWKPPAIYKS-FCEIDVEYFPFDEQTCFMKFGSWTYDGYTVDLRHLAQTEDSNQIEV 189
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 27.9 bits (59), Expect = 0.089
Identities = 26/83 (31%), Positives = 35/83 (42%)
Frame = -3
Query: 569 IVRTLRAFNHVDVPRETVATIKDSRIVVSWKPPEITNGPILAYTVELLPKIEQTSYLIPQ 390
IV A + +V T AT+K + V SWKPP I VE P EQ+ +
Sbjct: 120 IVLYNNADGNYEVTLMTKATLKYTGDV-SWKPPAIYKSS-CEINVEYFPFDEQSCIMKFG 177
Query: 389 SWCVMGNITSFEIVSLVASTNKV 321
SW G + + A +N V
Sbjct: 178 SWTYNGAQVDLKHMKQEAGSNLV 200
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 499 LSLIVATVSLGTSTWL 546
LSL+V TV++ T WL
Sbjct: 62 LSLVVVTVAISTGEWL 77
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 218 LFGVMLYGLSLLVGSLW 168
LFG YG+ L GSLW
Sbjct: 759 LFGRSGYGIGLQKGSLW 775
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 179 RPRETDHTA*PQRVNSTKPKILTLVSKM*LESSHYKCLMKPGSWNR 316
+ R D T +R S +PKI++ +S + +++YK ++N+
Sbjct: 64 KERSRDRT---ERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNK 106
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 179 RPRETDHTA*PQRVNSTKPKILTLVSKM*LESSHYKCLMKPGSWNR 316
+ R D T +R S +PKI++ +S + +++YK ++N+
Sbjct: 64 KERSRDRT---ERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNK 106
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 179 RPRETDHTA*PQRVNSTKPKILTLVSKM*LESSHYKCLMKPGSWNR 316
+ R D T +R S +PKI++ +S + +++YK ++N+
Sbjct: 64 KERSRDRT---ERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNK 106
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 179 RPRETDHTA*PQRVNSTKPKILTLVSKM*LESSHYKCLMKPGSWNR 316
+ R D T +R S +PKI++ +S + +++YK ++N+
Sbjct: 64 KERSRDRT---ERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNK 106
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 625 IASDYGLVSTVAAADQPRAL 566
I+ D G ++TVA + PRAL
Sbjct: 561 ISVDSGSINTVAEWEPPRAL 580
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.8
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 179 RPRETDHTA*PQRVNSTKPKILTLVSKM*LESSHYKCLMKPGSWN 313
+ R D T +R S +PKI++ +S + +++YK ++N
Sbjct: 63 KERSRDRT---ERERSREPKIISSLSNNTIHNNNYKYNYNNNNYN 104
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -3
Query: 452 ILAYTVELLPKIEQTSYLIPQSWCVMGNITS 360
I YT + P + T + PQ + +TS
Sbjct: 455 IRTYTQQQFPYVHDTLQIQPQEQLTLSKVTS 485
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C
protein.
Length = 548
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 27 DFNL*NSLNNHHC 65
D N S NNHHC
Sbjct: 56 DHNKEKSKNNHHC 68
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.7
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +2
Query: 212 QRVNSTKPKILTLVSKM*LESSHYKCLMKPGSWN 313
+R S +PKI++ +S + +++YK ++N
Sbjct: 71 ERERSREPKIISSLSNNTIHNNNYKYNYNNNNYN 104
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 494 IVVSWKPPEITNGPILAYTV 435
+ +SW PP NG I Y +
Sbjct: 1230 LFISWLPPLEPNGIITKYNL 1249
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 494 IVVSWKPPEITNGPILAYTV 435
+ +SW PP NG I Y +
Sbjct: 1226 LFISWLPPLEPNGIITKYNL 1245
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,036
Number of Sequences: 438
Number of extensions: 4202
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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