Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_O09
(369 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 80 6e-16
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 70 7e-13
10_02_0100 + 5296783-5297568 28 2.0
08_01_0897 - 8839134-8839718 28 2.0
06_01_0767 + 5732573-5732670,5733223-5733278,5733928-5734007,573... 28 2.0
10_08_0103 + 14818893-14819082,14819878-14819934,14820948-148210... 28 2.6
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 28 2.6
02_03_0307 + 17546263-17546299,17546522-17548018,17548859-175489... 28 2.6
12_02_0371 - 18187169-18188386 27 3.5
10_02_0125 - 5537541-5538758 27 3.5
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 27 4.6
02_05_0398 - 28644632-28644889,28644997-28645032,28645101-286453... 27 4.6
02_05_0030 + 25209067-25209130,25209231-25209400,25210482-252116... 27 4.6
01_04_0020 + 15142402-15143421 27 4.6
05_04_0256 - 19465636-19466709,19467649-19467765,19468168-194682... 27 6.1
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 27 6.1
11_06_0029 - 19405555-19405638,19405799-19405881,19405977-194061... 26 8.1
10_07_0077 + 12645091-12646750,12647612-12648273 26 8.1
09_03_0089 + 12265916-12267232 26 8.1
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 26 8.1
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 79.8 bits (188), Expect = 6e-16
Identities = 51/121 (42%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGPF N P+RR+ Q YVI TST++ + + K F+D YF EG
Sbjct: 129 VTGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYF---SRDKKQKAKKTEG- 183
Query: 182 DIFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHR 9
++F T+KE K +P E +K DQK VD +IKAI A PD L+ YL A F LR PH
Sbjct: 184 ELFETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPD---LKTYLGARFSLRDGDKPHE 239
Query: 8 L 6
+
Sbjct: 240 M 240
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 69.7 bits (163), Expect = 7e-13
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
ITGPF N P+RR+ Q YVI TST++ + K+ K F+D YF EG
Sbjct: 106 ITGPFKINGVPIRRVNQAYVIATSTKVDISGVKVDK-FDDKYF---ARDKKAKAKKTEG- 160
Query: 182 DIFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXP 15
++F T+KE K +P + +K DQK VD +IKAI PD LK+ G R+S+ P
Sbjct: 161 ELFETEKEATKNLP-DFKKDDQKAVDAELIKAIEVVPD-------LKSYLGARNSRWP 210
>10_02_0100 + 5296783-5297568
Length = 261
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 112 TRL*SKPSEPDPTRRCSADTSKRPSDSARAKXP 14
TR SKP P PT+ SA + +D A A P
Sbjct: 142 TRSSSKPPAPAPTKTASASDHAKKTDMAAAHKP 174
>08_01_0897 - 8839134-8839718
Length = 194
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 31 RSPKAALRYPRSTFLSGRAPMALITASSTVF*SVLRCSDGTYFSFFVAKMSSP 189
R+ +AA+R +T S + AL A S S+L C DG S F SSP
Sbjct: 22 RAARAAVRIAATTTASSPSSPALAAALSRTP-SLLDCMDGDDDSIFYTPASSP 73
>06_01_0767 +
5732573-5732670,5733223-5733278,5733928-5734007,
5735334-5735372,5735563-5735950,5736049-5737562
Length = 724
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 96 SHRSPTRQEGAPRIPQSGLR 37
SHR P QEGAP P S +R
Sbjct: 157 SHRWPEAQEGAPAFPPSTMR 176
>10_08_0103 +
14818893-14819082,14819878-14819934,14820948-14821056,
14821137-14821362,14821521-14821637,14821735-14821893
Length = 285
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -3
Query: 220 SASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTSK 47
S SN+QSN T K+R F +A+ + R S+R +P D A TSK
Sbjct: 212 SDSNIQSNKSAEHTGTTVKRRERFRCVNARIVLRTSSR--RRPIGVDFWDEYFASTSK 267
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 160 RNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 26
+NT LS+AK + +S ++ KPS + + +KR SD+ R
Sbjct: 639 KNTRKLSNAKESKDESPQVEPKPSSANDCDNPISQVAKRASDNIR 683
>02_03_0307 +
17546263-17546299,17546522-17548018,17548859-17548949,
17549054-17549621,17550591-17550670,17550993-17551077,
17551172-17551263,17551355-17551423,17551587-17551655,
17552217-17552510,17552761-17552797,17552883-17552972,
17553520-17553585,17553704-17553818,17553902-17553940,
17554519-17554700
Length = 1136
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 319 FLSAM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSN 197
FL+ + PP + H C N S++I R + N QSN
Sbjct: 545 FLNLVAKFPPTKRHINAEACSNLSLLIDDMRRKLNLNEQSN 585
>12_02_0371 - 18187169-18188386
Length = 405
Score = 27.5 bits (58), Expect = 3.5
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -3
Query: 172 PQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRC 65
PQ KRN H S RRQ TRL + P R C
Sbjct: 365 PQPKRNLRHHSGHYARRRQVTRLVVTGANAVPVRPC 400
>10_02_0125 - 5537541-5538758
Length = 405
Score = 27.5 bits (58), Expect = 3.5
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -3
Query: 172 PQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRC 65
PQ KRN H S RRQ TRL + P R C
Sbjct: 365 PQPKRNLRHHSGHYARRRQVTRLVVTGANAIPVRPC 400
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 27.1 bits (57), Expect = 4.6
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = -3
Query: 310 AM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKR---VMTSLPQK---KRNTF 149
A+ S+P S +N+S +S R+ASN N+ R V +S+ +K + ++
Sbjct: 135 AVKSSPISTLKKVPSLTENSSSSASSSFRRAASNATLNSPRSPSVTSSVTKKVGSRTSSM 194
Query: 148 HLSSAKPIRRQSTRL*SKPS 89
S+ PIR++S+ S+ S
Sbjct: 195 DKGSSMPIRKKSSTADSRDS 214
>02_05_0398 -
28644632-28644889,28644997-28645032,28645101-28645364,
28645439-28645522,28645718-28645798,28645888-28645965,
28646571-28646672,28646754-28646849,28646955-28647161,
28647246-28647493,28647577-28647773,28647997-28648112
Length = 588
Score = 27.1 bits (57), Expect = 4.6
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = -3
Query: 265 NCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSE 86
NC N + ++SR ++ Q ++K +TSLPQ+K+ S + +QS + KP+
Sbjct: 328 NCINQAPSLSSRNKKTLLQSQPSSK--VTSLPQQKQK--FRSPHLELHKQSEKS-KKPTS 382
Query: 85 PDP 77
+P
Sbjct: 383 SEP 385
>02_05_0030 + 25209067-25209130,25209231-25209400,25210482-25211668,
25211695-25212011,25212669-25213374,25214248-25215448
Length = 1214
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 10 RWGSWLERSPKAALRYPRSTFLSGRAPMALIT 105
R+ RSP A LR+PR F +G A+++
Sbjct: 1004 RYDGRCRRSPFAGLRHPRGVFWNGSLVWAMLS 1035
>01_04_0020 + 15142402-15143421
Length = 339
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 173 ATKKEKYVPSEQRKTDQKTVDEAVIKAIGARP 78
ATK+ +YVP + +D+K +++V + A P
Sbjct: 201 ATKQGQYVPMYAQDSDEKATEKSVSSPVTAYP 232
>05_04_0256 -
19465636-19466709,19467649-19467765,19468168-19468279,
19469019-19469167,19469378-19469449,19469544-19469609,
19471945-19472073,19474539-19474647,19475225-19475304,
19475408-19475533,19475607-19475657,19475738-19475920,
19476019-19476105,19476184-19476294,19476692-19476796,
19477513-19477678,19477769-19477941,19478022-19478094,
19479472-19479655,19479759-19480203
Length = 1203
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -3
Query: 337 RARYAVFLSA---M*SAPPPEFHSATSNCQNTSMMITSRR 227
R+RY +FLS + S PPE S NTS++ +RR
Sbjct: 455 RSRYKLFLSCSLILTSVIPPELPMELSIAVNTSLIALARR 494
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 26.6 bits (56), Expect = 6.1
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = -3
Query: 271 TSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLP---QKKRNTFHLSSAKPIRRQSTRL* 101
T + +S RR RS S +S ++ ++ P K R+ S P+RR +R
Sbjct: 522 TRSISRSSARSLQRRSRSRSLERSPVRKSVSRSPPTMDKGRSISRTSGRLPLRRSISRSP 581
Query: 100 SKPSEPDPTRRCSADTSKRPSDS 32
+P P+R +T + S S
Sbjct: 582 DRPYRRIPSRSPRKNTRRSISRS 604
>11_06_0029 -
19405555-19405638,19405799-19405881,19405977-19406118,
19406190-19406348,19406649-19406726,19406854-19406982,
19407468-19407563,19408896-19408988,19409378-19409608,
19410177-19410350,19410983-19411126,19411229-19411765
Length = 649
Score = 26.2 bits (55), Expect = 8.1
Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = -3
Query: 277 SATSNCQNTSMMITSRRIRSA---SNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTR 107
SA+S+ +S+ + S+ S+++ + R++ + + + HL++A + + R
Sbjct: 67 SASSSSLESSLASALAPLSSSPGLSDLRELSDRLLAARRELRERQEHLAAASSVADLAAR 126
Query: 106 L*SKPSEPDPTRRCSADTSKRP 41
L + + PDP +A +P
Sbjct: 127 LRAARASPDPLAAAAAAAELKP 148
>10_07_0077 + 12645091-12646750,12647612-12648273
Length = 773
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 107 AVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
A ++++ PD+ +L Y AA G ++ PH L
Sbjct: 52 AHLQSLAIDPDRHLLYSYSAAAHGFAAALLPHHL 85
>09_03_0089 + 12265916-12267232
Length = 438
Score = 26.2 bits (55), Expect = 8.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 61 RSTFLSGRAPMALITASSTVF*SVLRCSDGTYFSFFVAKMSSPSLRLTVRLTH 219
+ T S RAP ++T ++ F ++++ G FVA + +P+ L R H
Sbjct: 138 KRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPSPPFVAGVGAPAASLRTRFDH 190
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 26.2 bits (55), Expect = 8.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 141 AAQNRSEDSRRGCDQSHRSPTRQEGAPRIPQSGLRTP 31
+A R E SRR RSP R G+P P+ R+P
Sbjct: 3 SAVERREHSRRSGRSRSRSPARDRGSP--PRRRERSP 37
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,407,967
Number of Sequences: 37544
Number of extensions: 191333
Number of successful extensions: 635
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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