Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_O09
(369 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 98 9e-21
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 98 9e-21
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 98 9e-21
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 98 9e-21
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 98 9e-21
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 98 9e-21
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 98 9e-21
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 98 9e-21
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 98 9e-21
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 98 9e-21
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 98 9e-21
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 88 1e-17
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 39 0.006
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 29 3.5
AF151810-1|AAD34047.1| 359|Homo sapiens CGI-52 protein protein. 29 3.5
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 29 3.5
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 29 3.5
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 29 3.5
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 29 3.5
BC069209-1|AAH69209.1| 597|Homo sapiens Unknown (protein for IM... 29 4.7
BC051336-1|AAH51336.1| 597|Homo sapiens RAFTLIN protein protein. 29 4.7
D28113-1|BAA05659.1| 182|Homo sapiens MOBP protein. 28 8.2
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 28 8.2
BC017667-1|AAH17667.1| 683|Homo sapiens NAV3 protein protein. 28 8.2
AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein. 28 8.2
AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3 prot... 28 8.2
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 28 8.2
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 28 8.2
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG- 230
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 231 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG- 230
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 231 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG- 230
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 231 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG- 230
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 231 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG- 230
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 231 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG- 230
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 231 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG- 230
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 231 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRRQEG- 230
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 231 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG- 230
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 231 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 176 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG- 231
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 232 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 287
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.9 bits (233), Expect = 9e-21
Identities = 53/119 (44%), Positives = 70/119 (58%)
Frame = -2
Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
+TGP N PLRR Q++VI TST+I + N K+PKH D YF +EG
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG- 230
Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 231 EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 87.8 bits (208), Expect = 1e-17
Identities = 49/109 (44%), Positives = 65/109 (59%)
Frame = -2
Query: 332 PLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKY 153
PLRR Q++VI TST+I + N K+PKH D YF +EG +IF T+KEKY
Sbjct: 185 PLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKY 240
Query: 152 VPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRL 6
+EQRK DQK VD ++ I A P L+GYL++ F L + PH+L
Sbjct: 241 EITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKL 286
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/49 (46%), Positives = 27/49 (55%)
Frame = -2
Query: 266 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQK 120
K+PKH D YF EG+ IF T+KEKY +EQRK DQK
Sbjct: 146 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQK 190
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3
Query: 301 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 122
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 1682 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 1737
Query: 121 R-QSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 26
+ +S+R + S P + ++ + PS R
Sbjct: 1738 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 1768
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 162 REIRSI*AAQNRSEDSRRGCDQSH-RSPTRQEGAPRIPQSGLRTPLEPRXPS 10
REI S ++NRS R D+SH +P+R+ G R P + R R P+
Sbjct: 451 REISSSPTSKNRSH-GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPT 501
>AF151810-1|AAD34047.1| 359|Homo sapiens CGI-52 protein protein.
Length = 359
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -1
Query: 141 AAQNRSEDSRRGCDQSHRSPTRQEGAPRIPQSGLRTPLEPRXPSAAL 1
AA SE RR Q R+ TR G P +P L EP+ P L
Sbjct: 41 AASTLSEPPRR--TQESRTRTRALGLPTLPMEKLAASTEPQGPRPVL 85
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3
Query: 301 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 122
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 714 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 769
Query: 121 R-QSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 26
+ +S+R + S P + ++ + PS R
Sbjct: 770 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 800
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3
Query: 301 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 122
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 1682 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 1737
Query: 121 R-QSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 26
+ +S+R + S P + ++ + PS R
Sbjct: 1738 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 1768
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 162 REIRSI*AAQNRSEDSRRGCDQSH-RSPTRQEGAPRIPQSGLRTPLEPRXPS 10
REI S ++NRS R D+SH +P+R+ G R P + R R P+
Sbjct: 451 REISSSPTSKNRSH-GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPT 501
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3
Query: 301 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 122
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 205 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 260
Query: 121 R-QSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 26
+ +S+R + S P + ++ + PS R
Sbjct: 261 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 291
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3
Query: 301 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 122
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 1730 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 1785
Query: 121 R-QSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 26
+ +S+R + S P + ++ + PS R
Sbjct: 1786 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 1816
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 162 REIRSI*AAQNRSEDSRRGCDQSH-RSPTRQEGAPRIPQSGLRTPLEPRXPS 10
REI S ++NRS R D+SH +P+R+ G R P + R R P+
Sbjct: 499 REISSSPTSKNRSH-GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPT 549
>BC069209-1|AAH69209.1| 597|Homo sapiens Unknown (protein for
IMAGE:5434191) protein.
Length = 597
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -3
Query: 289 PEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQST 110
P++HS+ ++ +++ + T+ A + + NA+ SL +K T +SSA R QS
Sbjct: 182 PQYHSSVNSAGSSAPVSTANSTEDARDAK-NARGDHASLENEKPGTGDVSSAPAGRNQSP 240
Query: 109 RL*SKP 92
S P
Sbjct: 241 EPSSGP 246
>BC051336-1|AAH51336.1| 597|Homo sapiens RAFTLIN protein protein.
Length = 597
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -3
Query: 289 PEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQST 110
P++HS+ ++ +++ + T+ A + + NA+ SL +K T +SSA R QS
Sbjct: 182 PQYHSSVNSAGSSAPVSTANSTEDARDAK-NARGDHASLENEKPGTGDVSSAPAGRNQSP 240
Query: 109 RL*SKP 92
S P
Sbjct: 241 EPSSGP 246
>D28113-1|BAA05659.1| 182|Homo sapiens MOBP protein.
Length = 182
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1
Query: 171 HKKREIRSI*AAQNRSEDSRRGCDQSHRSPTRQEGAPRIPQSGLRTPLEPRXP 13
++K+E I A ++ SRR +SP R + P P + +R P +PR P
Sbjct: 53 YQKKEEDWICCACQKTRTSRRA-----KSPQRPKQQPAAPPAVVRAPAKPRSP 100
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 162 REIRSI*AAQNRSEDSRRGCDQSH-RSPTRQEGAPRIPQSGLRTPLEPRXPS 10
REI S ++NRS R D+SH +P+R+ G R P + R R P+
Sbjct: 451 REISSSPTSKNRSH-GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPT 501
>BC017667-1|AAH17667.1| 683|Homo sapiens NAV3 protein protein.
Length = 683
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -1
Query: 165 KREIRSI*AAQNRSEDSRRGCDQSHRSPTRQEGAPRIPQSG 43
+++++S AA+ ++ + G S + PTR G R+P +G
Sbjct: 218 QQDMQSSLAARYATQSNHSGIATSQKKPTRLPGPSRVPAAG 258
>AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein.
Length = 2385
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -1
Query: 165 KREIRSI*AAQNRSEDSRRGCDQSHRSPTRQEGAPRIPQSG 43
+++++S AA+ ++ + G S + PTR G R+P +G
Sbjct: 218 QQDMQSSLAARYATQSNHSGIATSQKKPTRLPGPSRVPAAG 258
>AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3
protein.
Length = 2282
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -1
Query: 165 KREIRSI*AAQNRSEDSRRGCDQSHRSPTRQEGAPRIPQSG 43
+++++S AA+ ++ + G S + PTR G R+P +G
Sbjct: 137 QQDMQSSLAARYATQSNHSGIATSQKKPTRLPGPSRVPAAG 177
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 162 REIRSI*AAQNRSEDSRRGCDQSH-RSPTRQEGAPRIPQSGLRTPLEPRXPS 10
REI S ++NRS R D+SH +P+R+ G R P + R R P+
Sbjct: 416 REISSSPTSKNRSH-GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPT 466
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 162 REIRSI*AAQNRSEDSRRGCDQSH-RSPTRQEGAPRIPQSGLRTPLEPRXPS 10
REI S ++NRS R D+SH +P+R+ G R P + R R P+
Sbjct: 241 REISSSPTSKNRSH-GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPT 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,635,646
Number of Sequences: 237096
Number of extensions: 1016441
Number of successful extensions: 3124
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3092
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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