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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_O09
         (369 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00036-4|AAK29850.1|  217|Caenorhabditis elegans Ribosomal prote...   100   6e-22
U00032-4|AAL32216.1|  953|Caenorhabditis elegans Rabphilin prote...    31   0.34 
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote...    31   0.34 
U00032-2|AAL32218.1|  962|Caenorhabditis elegans Rabphilin prote...    31   0.34 
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote...    31   0.34 
AF399852-1|AAK84870.1|  953|Caenorhabditis elegans rabphilin pro...    31   0.34 
Z50740-1|CAA90607.1| 1089|Caenorhabditis elegans Hypothetical pr...    28   1.8  
U58762-3|AAM15611.1|  331|Caenorhabditis elegans Hypothetical pr...    27   3.2  
U58762-2|AAK39302.1|  722|Caenorhabditis elegans Hypothetical pr...    27   3.2  
U58762-1|AAK39301.1|  732|Caenorhabditis elegans Hypothetical pr...    27   3.2  
AY741200-1|AAU89102.1|  596|Caenorhabditis elegans STE20-like se...    27   3.2  
AL132898-15|CAC14417.2|  596|Caenorhabditis elegans Hypothetical...    27   3.2  
Z70286-1|CAA94294.2|  194|Caenorhabditis elegans Hypothetical pr...    27   4.2  
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    27   4.2  
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ...    27   4.2  
Z83113-10|CAI46598.1|  556|Caenorhabditis elegans Hypothetical p...    27   5.5  
Z73975-5|CAA98278.2|  556|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    27   5.5  
AF068717-2|AAC17763.1|  325|Caenorhabditis elegans Serpentine re...    27   5.5  
AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine re...    26   7.3  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    26   7.3  
AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical ...    26   7.3  
Z68114-10|CAA92157.2|  322|Caenorhabditis elegans Hypothetical p...    26   9.7  
U80447-4|AAB37808.1|  560|Caenorhabditis elegans Temporarily ass...    26   9.7  
DQ645890-1|ABG34266.1|  560|Caenorhabditis elegans CIR-1 protein.      26   9.7  
AF099003-3|ABA00149.1|  759|Caenorhabditis elegans Hypothetical ...    26   9.7  
AC024791-2|AAK95891.1|  604|Caenorhabditis elegans Temporarily a...    26   9.7  

>U00036-4|AAK29850.1|  217|Caenorhabditis elegans Ribosomal protein,
           large subunitprotein 6 protein.
          Length = 217

 Score = 99.5 bits (237), Expect = 6e-22
 Identities = 50/120 (41%), Positives = 69/120 (57%)
 Frame = -2

Query: 362 ITGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGD 183
           +TGP   N  PLRRI Q +VI TS ++++   K+P+H ND+YF               G 
Sbjct: 103 VTGPHKINGFPLRRIGQAFVIATSLKVNVSGVKIPEHINDEYFKRKSTAQKT------GK 156

Query: 182 DIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQXPHRLR 3
           +IFA+ K +Y  SEQRK D KTVD  ++ AI   P+ K L GYL   F L  +Q PH+++
Sbjct: 157 NIFASGKTEYTVSEQRKKDIKTVDAPILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQ 216


>U00032-4|AAL32216.1|  953|Caenorhabditis elegans Rabphilin protein
           1, isoform a protein.
          Length = 953

 Score = 30.7 bits (66), Expect = 0.34
 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
 Frame = -3

Query: 295 PPPEFHSATS--NCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 122
           PPP   S TS  NC ++ + +   +  SAS   S   R + S      N   + + +   
Sbjct: 498 PPPPISSRTSPDNCNSSPLNVMEHKSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHN 557

Query: 121 RQSTRL*SKPSEPDPTRRCSADTSKRPSDSARAK 20
             + +L S+ S  +     S+     P D  + K
Sbjct: 558 DINKKLISQTSRAESPLAASSSFLSSPDDDTKQK 591


>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
           1, isoform b protein.
          Length = 1028

 Score = 30.7 bits (66), Expect = 0.34
 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
 Frame = -3

Query: 295 PPPEFHSATS--NCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 122
           PPP   S TS  NC ++ + +   +  SAS   S   R + S      N   + + +   
Sbjct: 573 PPPPISSRTSPDNCNSSPLNVMEHKSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHN 632

Query: 121 RQSTRL*SKPSEPDPTRRCSADTSKRPSDSARAK 20
             + +L S+ S  +     S+     P D  + K
Sbjct: 633 DINKKLISQTSRAESPLAASSSFLSSPDDDTKQK 666


>U00032-2|AAL32218.1|  962|Caenorhabditis elegans Rabphilin protein
           1, isoform c protein.
          Length = 962

 Score = 30.7 bits (66), Expect = 0.34
 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
 Frame = -3

Query: 295 PPPEFHSATS--NCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 122
           PPP   S TS  NC ++ + +   +  SAS   S   R + S      N   + + +   
Sbjct: 507 PPPPISSRTSPDNCNSSPLNVMEHKSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHN 566

Query: 121 RQSTRL*SKPSEPDPTRRCSADTSKRPSDSARAK 20
             + +L S+ S  +     S+     P D  + K
Sbjct: 567 DINKKLISQTSRAESPLAASSSFLSSPDDDTKQK 600


>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
           1, isoform d protein.
          Length = 1106

 Score = 30.7 bits (66), Expect = 0.34
 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
 Frame = -3

Query: 295 PPPEFHSATS--NCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 122
           PPP   S TS  NC ++ + +   +  SAS   S   R + S      N   + + +   
Sbjct: 651 PPPPISSRTSPDNCNSSPLNVMEHKSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHN 710

Query: 121 RQSTRL*SKPSEPDPTRRCSADTSKRPSDSARAK 20
             + +L S+ S  +     S+     P D  + K
Sbjct: 711 DINKKLISQTSRAESPLAASSSFLSSPDDDTKQK 744


>AF399852-1|AAK84870.1|  953|Caenorhabditis elegans rabphilin
           protein.
          Length = 953

 Score = 30.7 bits (66), Expect = 0.34
 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
 Frame = -3

Query: 295 PPPEFHSATS--NCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 122
           PPP   S TS  NC ++ + +   +  SAS   S   R + S      N   + + +   
Sbjct: 498 PPPPISSRTSPDNCNSSPLNVMEHKSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHN 557

Query: 121 RQSTRL*SKPSEPDPTRRCSADTSKRPSDSARAK 20
             + +L S+ S  +     S+     P D  + K
Sbjct: 558 DINKKLISQTSRAESPLAASSSFLSSPDDDTKQK 591


>Z50740-1|CAA90607.1| 1089|Caenorhabditis elegans Hypothetical
           protein F31B12.2 protein.
          Length = 1089

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -3

Query: 223 RSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPS 89
           RSA +V+    +V+  + +  R + HLS+++PI  +S    S P+
Sbjct: 364 RSAVSVEGVLLKVLAEVAELVRQSQHLSASEPITEESPSAGSPPA 408


>U58762-3|AAM15611.1|  331|Caenorhabditis elegans Hypothetical
           protein T27F7.2c protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = -3

Query: 220 SASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTSKRP 41
           S+S    N KR+ T  PQ       L     +R  ++     P EP PT  C+A T+   
Sbjct: 58  SSSTSSVNPKRMSTIEPQAPTREQLLQLQNQMRCAASS--PVPEEPRPTDLCAASTTTST 115

Query: 40  SDSARAKXPIG 8
           S  A +    G
Sbjct: 116 SSVASSSSSNG 126


>U58762-2|AAK39302.1|  722|Caenorhabditis elegans Hypothetical
           protein T27F7.2b protein.
          Length = 722

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = -3

Query: 220 SASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTSKRP 41
           S+S    N KR+ T  PQ       L     +R  ++     P EP PT  C+A T+   
Sbjct: 427 SSSTSSVNPKRMSTIEPQAPTREQLLQLQNQMRCAASS--PVPEEPRPTDLCAASTTTST 484

Query: 40  SDSARAKXPIG 8
           S  A +    G
Sbjct: 485 SSVASSSSSNG 495


>U58762-1|AAK39301.1|  732|Caenorhabditis elegans Hypothetical
           protein T27F7.2a protein.
          Length = 732

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = -3

Query: 220 SASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTSKRP 41
           S+S    N KR+ T  PQ       L     +R  ++     P EP PT  C+A T+   
Sbjct: 437 SSSTSSVNPKRMSTIEPQAPTREQLLQLQNQMRCAASS--PVPEEPRPTDLCAASTTTST 494

Query: 40  SDSARAKXPIG 8
           S  A +    G
Sbjct: 495 SSVASSSSSNG 505


>AY741200-1|AAU89102.1|  596|Caenorhabditis elegans STE20-like
           serine/threonine kinase protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = -3

Query: 277 SATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*S 98
           +  +N   TS   ++    SA+N  +      T+  Q    TF+  +   I   ST   S
Sbjct: 7   AGNTNTTTTSSAASAAAAHSAANASTITSEYSTT--QTTTGTFNTDTLSSIGSTSTLHGS 64

Query: 97  KPSEPDP 77
           +PS+P P
Sbjct: 65  QPSQPPP 71


>AL132898-15|CAC14417.2|  596|Caenorhabditis elegans Hypothetical
           protein Y59A8B.23 protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = -3

Query: 277 SATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*S 98
           +  +N   TS   ++    SA+N  +      T+  Q    TF+  +   I   ST   S
Sbjct: 7   AGNTNTTTTSSAASAAAAHSAANASTITSEYSTT--QTTTGTFNTDTLSSIGSTSTLHGS 64

Query: 97  KPSEPDP 77
           +PS+P P
Sbjct: 65  QPSQPPP 71


>Z70286-1|CAA94294.2|  194|Caenorhabditis elegans Hypothetical
           protein K08C7.4 protein.
          Length = 194

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -2

Query: 182 DIFATKKEKYVPSEQRKTDQ-KTVDEAVIKAIGARP-DKK 69
           D   TK E  VPSE  KT++ ++V+E  ++    +P DKK
Sbjct: 15  DADITKPELVVPSEDPKTEEIESVEEKTVEKSTEKPVDKK 54


>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
            presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 208  VQSNAKRVMTSLPQKKRNTFHLSSAK 131
            + +NA R+MT LP    N  HLS+A+
Sbjct: 1888 LSANACRIMTQLPINPSNIEHLSTAE 1913


>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
            protein F07B7.12 protein.
          Length = 1900

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 208  VQSNAKRVMTSLPQKKRNTFHLSSAK 131
            + +NA R+MT LP    N  HLS+A+
Sbjct: 1824 LSANACRIMTQLPINPSNIEHLSTAE 1849


>Z83113-10|CAI46598.1|  556|Caenorhabditis elegans Hypothetical
           protein K08H10.2b protein.
          Length = 556

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
 Frame = -3

Query: 277 SATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAK----PIRRQST 110
           SA+    +T   +TS+     + V+S+  +   +L +KKR  F+ +  K    P+  +  
Sbjct: 415 SASEAAHDTKEAVTSKAAEVENVVKSSLGQRAAALHEKKREFFYSTPEKTSTVPVFVEDL 474

Query: 109 RL*SKPSEPDPTRRCSADTSKRPSDSAR 26
              +    PD      A+  K  +D+A+
Sbjct: 475 NEQTLDDVPDKVEDIVAEVEKSAADAAK 502


>Z73975-5|CAA98278.2|  556|Caenorhabditis elegans Hypothetical
           protein K08H10.2b protein.
          Length = 556

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
 Frame = -3

Query: 277 SATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAK----PIRRQST 110
           SA+    +T   +TS+     + V+S+  +   +L +KKR  F+ +  K    P+  +  
Sbjct: 415 SASEAAHDTKEAVTSKAAEVENVVKSSLGQRAAALHEKKREFFYSTPEKTSTVPVFVEDL 474

Query: 109 RL*SKPSEPDPTRRCSADTSKRPSDSAR 26
              +    PD      A+  K  +D+A+
Sbjct: 475 NEQTLDDVPDKVEDIVAEVEKSAADAAK 502


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
           protein Y18D10A.1 protein.
          Length = 1634

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +1

Query: 28  ERSPKAALRYPRSTFLSGRAPMALITASST 117
           + +P A L  P ++ +SGRAP AL T+S T
Sbjct: 802 QENPTAEL--PTTSEISGRAPQALPTSSQT 829


>AF068717-2|AAC17763.1|  325|Caenorhabditis elegans Serpentine
           receptor, class h protein248 protein.
          Length = 325

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +1

Query: 85  APMALITASSTV-F*SVLRCSDGTYFSFFVAKMSSPSLRLTVRLTHFLFFLK*SSLKCFG 261
           +P  LI  S+ + F  V  C  G Y   F       S++  +   HF  FL   ++ CFG
Sbjct: 12  SPEFLIRVSNVITFFEVPLCIFGAYCILFKTPEKMKSVKWLMMNLHFWSFLSDLTICCFG 71


>AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 23 protein.
          Length = 293

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = +3

Query: 102 HSLVDCLLIGFALLRWNVFLFFC 170
           +S++ CL+ G+A+ +++   +FC
Sbjct: 127 NSVILCLIFGYAIFQYSFIYYFC 149


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = -3

Query: 244  MITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHL--SSAKPIRRQSTRL*SKPSEPDPTR 71
            ++T     +++   +++ +   SL ++K     +  +  +PIR+ S R   K  +P P +
Sbjct: 3329 LLTPSNPETSNTASTSSSKQPKSLSEEKITATQMIQTRGRPIRKLSHRRQLKIGDPSPLQ 3388

Query: 70   RCSADTSKRPSDSARAKXP 14
                 +  RP+  +  K P
Sbjct: 3389 LSGDSSLPRPAQPSPEKPP 3407


>AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.3 protein.
          Length = 563

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = -3

Query: 262 CQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPI 125
           C N  +    RR +  + V     ++ +S+PQ +    HL+S   +
Sbjct: 436 CSNLIIKRKERRAKDFARVNRTVMKMSSSMPQLQEQHSHLNSTSSV 481


>Z68114-10|CAA92157.2|  322|Caenorhabditis elegans Hypothetical
           protein F17A2.13 protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -3

Query: 163 KRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTSKRPSDSARAK 20
           K++   + S  P RR+ TR+ S+  +      CS+++S   + S+ +K
Sbjct: 153 KKDNLDVESRSPARRE-TRIMSRRKQESSVSSCSSESSHCSASSSLSK 199


>U80447-4|AAB37808.1|  560|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 326 protein.
          Length = 560

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = -3

Query: 241 ITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLS-----SAKPIRRQSTRL*SKPSEPDP 77
           +  RR  S  N Q  +++  + L +++ +    S     S  P R++  R    PS+  P
Sbjct: 455 VRRRRSPSPDNRQLGSRKQYSPLRRRQSSPMVASPRRRRSPSPERQRKRR---SPSDSPP 511

Query: 76  TRRCSADTSKRPSDSARAKXPI 11
           TRR S    +R    +  K P+
Sbjct: 512 TRRLSTSPIRRRRSPSPNKLPV 533


>DQ645890-1|ABG34266.1|  560|Caenorhabditis elegans CIR-1 protein.
          Length = 560

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = -3

Query: 241 ITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLS-----SAKPIRRQSTRL*SKPSEPDP 77
           +  RR  S  N Q  +++  + L +++ +    S     S  P R++  R    PS+  P
Sbjct: 455 VRRRRSPSPDNRQLGSRKQYSPLRRRQSSPMVASPRRRRSPSPERQRKRR---SPSDSPP 511

Query: 76  TRRCSADTSKRPSDSARAKXPI 11
           TRR S    +R    +  K P+
Sbjct: 512 TRRLSTSPIRRRRSPSPNKLPV 533


>AF099003-3|ABA00149.1|  759|Caenorhabditis elegans Hypothetical
           protein Y59C2A.3 protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = -2

Query: 185 DDIFATKKEKYVPSEQRKTDQK-TVD-EAVIKAIGARPD 75
           ++ FA  + KY   +QRKT+++  +D E+++  + ++PD
Sbjct: 124 EEKFAYNRRKYESRKQRKTEERPLIDIESLMPMLESKPD 162


>AC024791-2|AAK95891.1|  604|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 63 protein.
          Length = 604

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -3

Query: 142 SSAKPIRRQSTRL*SKPSEPDPTRRCSADTSKRP--SDSARAKXP 14
           S A+P  +++T    KP+ P   R+ + D+SK+P  SDS     P
Sbjct: 369 SLAEPENKENT----KPNSPYSLRKRAVDSSKKPGKSDSPAVSSP 409


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,396,924
Number of Sequences: 27780
Number of extensions: 154559
Number of successful extensions: 552
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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