Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_O08
(711 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_1076 + 11184047-11184270,11186178-11186352,11186554-111866... 44 9e-05
05_06_0042 - 25131962-25132149,25132261-25132345,25132750-251327... 44 2e-04
03_02_0909 - 12310460-12310759,12310882-12310989,12311099-123112... 40 0.002
07_03_1698 + 28803971-28804534,28804614-28804696,28804780-288049... 39 0.005
10_08_0364 + 17217631-17217833,17218134-17218308,17218391-172184... 38 0.008
01_01_0620 - 4621291-4621379,4621722-4621803,4622238-4622282,462... 37 0.018
05_03_0086 + 8279518-8280320,8280923-8281844 32 0.52
01_01_0938 + 7400843-7401522,7402192-7403065 30 1.6
02_02_0472 - 10725234-10726119,10726201-10726808 30 2.1
06_02_0007 - 10533689-10534565,10535054-10535946 28 6.4
02_05_0585 + 30155021-30155910,30156130-30157006 28 6.4
02_02_0453 + 10420585-10421661,10422015-10422146,10422232-104224... 28 6.4
09_04_0520 + 18286435-18287279,18287818-18288697 28 8.4
08_02_1092 + 24267737-24268641,24269005-24269884 28 8.4
>12_01_1076 +
11184047-11184270,11186178-11186352,11186554-11186637,
11186712-11186953,11187029-11187266,11187814-11187893,
11187968-11188052,11188148-11188279,11188358-11188471,
11189550-11189594,11189840-11189924,11190043-11190102,
11190178-11190317
Length = 567
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -1
Query: 708 EIQKHKWFXGFNWEGLAQRSLEPPIVPTVNSAIDTHNFDQY 586
EI+ H WF G WE L Q +E +P VN +DT NF+++
Sbjct: 418 EIKAHPWFKGLEWEKLYQ--MEAAFIPEVNDELDTQNFEKF 456
>05_06_0042 -
25131962-25132149,25132261-25132345,25132750-25132797,
25133084-25133197,25133279-25133410,25134029-25134124,
25134771-25135005,25135054-25135322,25135408-25135491,
25136529-25136703,25138018-25138229
Length = 545
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = -1
Query: 708 EIQKHKWFXGFNWEGLAQRSLEPPIVPTVNSAIDTHNFDQY 586
EI+ H WF G WE L Q ++ +P VNS +DT NF+++
Sbjct: 399 EIKAHPWFRGLPWERLYQ--MKAAFIPEVNSELDTQNFEKF 437
>03_02_0909 -
12310460-12310759,12310882-12310989,12311099-12311272,
12311370-12311490,12311569-12311651,12311754-12312420,
12314073-12314440
Length = 606
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 708 EIQKHKWFXGFNWEGLAQRSLEPPIVPTVNSAIDTHNFDQ 589
EI+ HKWF NW+ L R ++P P V NFD+
Sbjct: 526 EIKNHKWFKSVNWKKLDSRQIQPSFRPNVAGKTCIANFDE 565
>07_03_1698 +
28803971-28804534,28804614-28804696,28804780-28804900,
28804982-28805155,28805245-28805349,28805439-28805765
Length = 457
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 708 EIQKHKWFXGFNWEGLAQRSLEPPIVPTVNSAIDTHNFDQ 589
EI++HKW NW L R ++P P V+ NFD+
Sbjct: 368 EIKRHKWLKPINWRKLEARQIQPSFRPNVSGLTCIANFDE 407
>10_08_0364 +
17217631-17217833,17218134-17218308,17218391-17218474,
17218561-17218802,17218883-17219108,17219246-17219325,
17219408-17219492,17219665-17219796,17219927-17220040,
17220123-17220170,17220413-17220497,17220722-17220834
Length = 528
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1
Query: 708 EIQKHKWFXGFNWEGLAQRSLEPPIVPTVNSAIDTHNFDQY 586
EI++H WF G W+ L + +E P V +DT NF+++
Sbjct: 407 EIKEHSWFSGVEWDKLYE--IEAAYQPQVTDELDTQNFEKF 445
>01_01_0620 -
4621291-4621379,4621722-4621803,4622238-4622282,
4623701-4623892,4625224-4625337,4625430-4625561,
4626356-4626440,4626526-4626605,4626791-4627034,
4627376-4627617,4628232-4628315,4628427-4628601,
4629351-4629464,4630025-4630236
Length = 629
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 708 EIQKHKWFXGFNWEGLAQRSLEPPIVPTVNSAIDTHNFDQY 586
+I+ H WF G WE L + +E P VN +DT NF ++
Sbjct: 454 QIKAHPWFRGVAWEKLYE--MEAAFKPQVNDELDTQNFMKF 492
>05_03_0086 + 8279518-8280320,8280923-8281844
Length = 574
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1
Query: 711 TEIQKHKWFXGFNWEGLAQRSLEPPIVP 628
TEI++H +F G NW RSL PP VP
Sbjct: 494 TEIKQHPFFDGVNW--ALVRSLTPPSVP 519
>01_01_0938 + 7400843-7401522,7402192-7403065
Length = 517
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 711 TEIQKHKWFXGFNWEGLAQRSLEPPIVP 628
TEI++H +F G NW RS PP VP
Sbjct: 455 TEIKQHPFFEGVNW--ALVRSAHPPSVP 480
>02_02_0472 - 10725234-10726119,10726201-10726808
Length = 497
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 711 TEIQKHKWFXGFNWEGLAQRSLEPPIVPTVNSA 613
TE+++H +F G NW RS PP +P + A
Sbjct: 423 TEVKQHPFFDGVNW--ALVRSAMPPYIPEADVA 453
>06_02_0007 - 10533689-10534565,10535054-10535946
Length = 589
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 711 TEIQKHKWFXGFNWEGLAQRSLEPPIVP 628
TEI++H +F G NW + R PP VP
Sbjct: 525 TEIKQHPFFEGVNWALI--RCASPPEVP 550
>02_05_0585 + 30155021-30155910,30156130-30157006
Length = 588
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 711 TEIQKHKWFXGFNWEGLAQRSLEPPIVP 628
TEI++H +F G NW + R PP VP
Sbjct: 524 TEIKQHPFFEGVNWALI--RCASPPEVP 549
>02_02_0453 + 10420585-10421661,10422015-10422146,10422232-10422456,
10422555-10422680,10422777-10422839,10423214-10423296,
10424078-10424309,10424421-10424489,10424532-10424731,
10424819-10424894,10425015-10425081,10425194-10425471,
10425600-10425787,10426235-10426391,10426496-10426741
Length = 1072
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 705 IQKHKWFXGFNWEGLAQRSLEPP--IVPTVNSAIDT 604
+++H WF G +W+ +A + P I V+S ++T
Sbjct: 1009 VKRHPWFDGIDWKQIADGTYTVPQEITDRVDSYVET 1044
>09_04_0520 + 18286435-18287279,18287818-18288697
Length = 574
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 711 TEIQKHKWFXGFNWEGLAQRSLEPPIVP 628
TEI++H +F G NW + R PP +P
Sbjct: 512 TEIKQHPFFEGVNWALI--RCASPPDIP 537
>08_02_1092 + 24267737-24268641,24269005-24269884
Length = 594
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 711 TEIQKHKWFXGFNWEGLAQRSLEPPIVP 628
TEI++H +F G NW + R PP +P
Sbjct: 533 TEIKQHPFFEGVNWALI--RCASPPEIP 558
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,492,916
Number of Sequences: 37544
Number of extensions: 274671
Number of successful extensions: 542
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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