Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_O08
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    84   1e-18
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   6.6  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 83.8 bits (198), Expect = 1e-18
 Identities = 36/61 (59%), Positives = 43/61 (70%)
 Frame = -1

Query: 711 TEIQKHKWFXGFNWEGLAQRSLEPPIVPTVNSAIDTHNFDQYXXXXXXXXXXDLSGWDAN 532
           +EIQKHKWF GFNWEGL  R+LEPPI+P V +A DT NFD+Y          D+SGWD +
Sbjct: 618 SEIQKHKWFDGFNWEGLRARTLEPPIMPRVQNATDTTNFDEYPPDSDPPPPDDISGWDND 677

Query: 531 F 529
           F
Sbjct: 678 F 678


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
 Frame = -1

Query: 690 WFXG--FNWEGLAQRSLEPPIVPT 625
           W  G   +WE  A   LEP  VP+
Sbjct: 680 WLLGSRLDWEDHASSPLEPSAVPS 703


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,260
Number of Sequences: 438
Number of extensions: 3513
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)