Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_O04
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J03358-1|AAA61190.1|  822|Homo sapiens FER protein.                    31   4.8  
BC051850-1|AAH51850.1|  343|Homo sapiens transmembrane protein 1...    30   6.3  
BC029487-1|AAH29487.1|  322|Homo sapiens TMEM120A protein protein.     30   6.3  
AF327923-1|AAK16442.1|  343|Homo sapiens transmembrane protein i...    30   6.3  

>J03358-1|AAA61190.1|  822|Homo sapiens FER protein.
          Length = 822

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +2

Query: 41  PKQKRRQLNNTCQLCGVF---GNLLEIFAGSLK*KSIMSERFCKSHLPFTLRV 190
           PK K+  L++   + G     GN  E++ G+LK K+ ++ + CK  LP  L++
Sbjct: 551 PKDKKWILSHEDVILGELLGKGNFGEVYKGTLKDKTSVAVKTCKEDLPQELKI 603


>BC051850-1|AAH51850.1|  343|Homo sapiens transmembrane protein 120A
           protein.
          Length = 343

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -3

Query: 167 EIYKISRSLCFFILNYLQKFLINFRIHHTADMYYLVVYVFVLEITEIDVANKG 9
           E +K+  ++   ++++  +FL+N R+   A  + LV Y   L I E  + N G
Sbjct: 134 EKFKLYLTIILILISFTCRFLLNSRVTDAAFNFLLVWYYCTLTIRESILINNG 186


>BC029487-1|AAH29487.1|  322|Homo sapiens TMEM120A protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -3

Query: 167 EIYKISRSLCFFILNYLQKFLINFRIHHTADMYYLVVYVFVLEITEIDVANKG 9
           E +K+  ++   ++++  +FL+N R+   A  + LV Y   L I E  + N G
Sbjct: 134 EKFKLYLTIILILISFTCRFLLNSRVTDAAFNFLLVWYYCTLTIRESILINNG 186


>AF327923-1|AAK16442.1|  343|Homo sapiens transmembrane protein
           induced by tumor necrosis factor alpha protein.
          Length = 343

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -3

Query: 167 EIYKISRSLCFFILNYLQKFLINFRIHHTADMYYLVVYVFVLEITEIDVANKG 9
           E +K+  ++   ++++  +FL+N R+   A  + LV Y   L I E  + N G
Sbjct: 134 EKFKLYLTIILILISFTCRFLLNSRVTDAAFNFLLVWYYCTLTIRESILINNG 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,313,477
Number of Sequences: 237096
Number of extensions: 1261944
Number of successful extensions: 1624
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)