Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_N23
         (334 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK095631-1|BAC04594.1|  134|Homo sapiens protein ( Homo sapiens ...    31   1.1  
AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens ...    29   2.6  
BC064515-1|AAH64515.1|  379|Homo sapiens raptor protein protein.       29   3.4  
AY090663-1|AAM09075.1| 1335|Homo sapiens raptor protein.               29   3.4  
AB082951-1|BAC06490.1| 1335|Homo sapiens p150 target of rapamyci...    29   3.4  
BC125189-1|AAI25190.1|  752|Homo sapiens zinc finger protein 425...    28   7.9  
AY621067-1|AAT40438.1|  752|Homo sapiens zinc finger protein 425...    28   7.9  

>AK095631-1|BAC04594.1|  134|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38312 fis, clone FCBBF3021506. ).
          Length = 134

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = -2

Query: 222 CVC-CRKAFGV*VPSCLHRPSCRCIYFTCCV-LCIFRLLTSWLFCLHL 85
           CVC CR    V +  C+  P C C+Y    V +C+  +      C H+
Sbjct: 7   CVCMCRWCLCVCIYMCVCVPVCMCVYVCVYVRICVICVCVCVFVCAHM 54


>AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45585 fis, clone BRTHA3013882. ).
          Length = 201

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = -2

Query: 222 CVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLFCLHL 85
           CVC      V +  CLH   C C  F C  LC+   L   + CLHL
Sbjct: 70  CVCLCVCVSVCLCVCLHLCVCVC-GFVCLCLCVCVCLCVCV-CLHL 113


>BC064515-1|AAH64515.1|  379|Homo sapiens raptor protein protein.
          Length = 379

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = +3

Query: 198 QRLCGSKRKNSSEQQKFEHVDXSGLVRPSIILKMPMHNHRPAEFI 332
           ++LC S R+N+ E++   H +  G+ RP++  ++ + N    ++I
Sbjct: 131 KKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYI 175


>AY090663-1|AAM09075.1| 1335|Homo sapiens raptor protein.
          Length = 1335

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = +3

Query: 198 QRLCGSKRKNSSEQQKFEHVDXSGLVRPSIILKMPMHNHRPAEFI 332
           ++LC S R+N+ E++   H +  G+ RP++  ++ + N    ++I
Sbjct: 131 KKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYI 175


>AB082951-1|BAC06490.1| 1335|Homo sapiens p150 target of rapamycin
           (TOR)-scaffold protein containing WD-repeats protein.
          Length = 1335

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = +3

Query: 198 QRLCGSKRKNSSEQQKFEHVDXSGLVRPSIILKMPMHNHRPAEFI 332
           ++LC S R+N+ E++   H +  G+ RP++  ++ + N    ++I
Sbjct: 131 KKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYI 175


>BC125189-1|AAI25190.1|  752|Homo sapiens zinc finger protein 425
           protein.
          Length = 752

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 234 RCYSCVCCRKAFGV 193
           RCYSC  CRK F V
Sbjct: 188 RCYSCYVCRKVFQV 201


>AY621067-1|AAT40438.1|  752|Homo sapiens zinc finger protein 425
           protein.
          Length = 752

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 234 RCYSCVCCRKAFGV 193
           RCYSC  CRK F V
Sbjct: 188 RCYSCYVCRKVFQV 201


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,235,929
Number of Sequences: 237096
Number of extensions: 552591
Number of successful extensions: 1890
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1889
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)