Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_N23
(334 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF197345-1|AAF07212.1| 1013|Drosophila melanogaster prominin-lik... 29 1.1
AF127935-1|AAD22487.2| 1013|Drosophila melanogaster prominin-lik... 29 1.1
AE014296-563|AAN11531.1| 1013|Drosophila melanogaster CG7740-PC,... 29 1.1
AE014296-562|AAN11530.1| 1013|Drosophila melanogaster CG7740-PB,... 29 1.1
AE014296-561|AAF47716.2| 1013|Drosophila melanogaster CG7740-PA,... 29 1.1
AY118342-1|AAM48371.1| 686|Drosophila melanogaster LD46263p pro... 29 1.5
AE013599-2855|AAF57579.1| 655|Drosophila melanogaster CG7461-PA... 29 1.5
AE013599-1199|AAF58730.2| 686|Drosophila melanogaster CG12942-P... 29 1.5
AY121686-1|AAM52013.1| 946|Drosophila melanogaster RE37047p pro... 27 4.4
AE014135-186|AAF59386.3| 946|Drosophila melanogaster CG11062-PA... 27 4.4
>AF197345-1|AAF07212.1| 1013|Drosophila melanogaster prominin-like
protein protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 231 CYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 97
CY C CC + P C + + + CC +C+ L+ +F
Sbjct: 186 CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228
>AF127935-1|AAD22487.2| 1013|Drosophila melanogaster prominin-like
protein protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 231 CYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 97
CY C CC + P C + + + CC +C+ L+ +F
Sbjct: 186 CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228
>AE014296-563|AAN11531.1| 1013|Drosophila melanogaster CG7740-PC,
isoform C protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 231 CYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 97
CY C CC + P C + + + CC +C+ L+ +F
Sbjct: 186 CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228
>AE014296-562|AAN11530.1| 1013|Drosophila melanogaster CG7740-PB,
isoform B protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 231 CYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 97
CY C CC + P C + + + CC +C+ L+ +F
Sbjct: 186 CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228
>AE014296-561|AAF47716.2| 1013|Drosophila melanogaster CG7740-PA,
isoform A protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 231 CYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 97
CY C CC + P C + + + CC +C+ L+ +F
Sbjct: 186 CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228
>AY118342-1|AAM48371.1| 686|Drosophila melanogaster LD46263p
protein.
Length = 686
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/63 (25%), Positives = 24/63 (38%)
Frame = -2
Query: 273 RVHXNQHVQISAVRCYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLFC 94
RVH + +S Y+C C K F H+ C+ C C + + +
Sbjct: 404 RVHTPVQIAVSPTESYACTACDKVFNQKASLHSHQRFCQVKDVVHCSFCDQQFNSMRKYE 463
Query: 93 LHL 85
LHL
Sbjct: 464 LHL 466
>AE013599-2855|AAF57579.1| 655|Drosophila melanogaster CG7461-PA
protein.
Length = 655
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 74 MGPSRCRQNSQEVSRRNMQSTQQVKYMXRQLGRCRQLGTHTPK 202
+GP N+ E R+ + Q +Y+ CRQ+ TH+PK
Sbjct: 16 LGPKGDLPNNFETMWRH--TIQSTRYLAGNASLCRQIATHSPK 56
>AE013599-1199|AAF58730.2| 686|Drosophila melanogaster CG12942-PA
protein.
Length = 686
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/63 (25%), Positives = 24/63 (38%)
Frame = -2
Query: 273 RVHXNQHVQISAVRCYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLFC 94
RVH + +S Y+C C K F H+ C+ C C + + +
Sbjct: 404 RVHTPVQIAVSPTESYACTACDKVFNQKASLHSHQRFCQVKDVVHCSFCDQQFNSMRKYE 463
Query: 93 LHL 85
LHL
Sbjct: 464 LHL 466
>AY121686-1|AAM52013.1| 946|Drosophila melanogaster RE37047p
protein.
Length = 946
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = -2
Query: 267 HXNQHVQISAVRCY---SCVCCRKAFGV*VPSCLHRPSCRCIYFTCC 136
H RC+ C+CCR+ V V C C C CC
Sbjct: 9 HSQSGAPFKGSRCFFNCQCICCRQGCCVVVVKC-----CCCFNLNCC 50
>AE014135-186|AAF59386.3| 946|Drosophila melanogaster CG11062-PA
protein.
Length = 946
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = -2
Query: 267 HXNQHVQISAVRCY---SCVCCRKAFGV*VPSCLHRPSCRCIYFTCC 136
H RC+ C+CCR+ V V C C C CC
Sbjct: 9 HSQSGAPFKGSRCFFNCQCICCRQGCCVVVVKC-----CCCFNLNCC 50
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,938,164
Number of Sequences: 53049
Number of extensions: 171537
Number of successful extensions: 518
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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