Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_N22
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 124 7e-29
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 109 2e-24
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 109 2e-24
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 84 9e-17
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 75 4e-14
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 64 7e-11
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 55 6e-08
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 33 0.21
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 33 0.21
U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF068716-1|AAC17747.1| 247|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81563-3|CAB04565.1| 222|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical p... 29 3.4
U80023-10|AAG24042.1| 97|Caenorhabditis elegans Hypothetical p... 28 6.0
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 124 bits (299), Expect = 7e-29
Identities = 55/60 (91%), Positives = 58/60 (96%)
Frame = -3
Query: 734 VLLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 555
VLL+FAN QDLP AMNAAE+TDKLGLHSLRNR+WYIQATCATSGDGLYEGLDWLSNQLKN
Sbjct: 120 VLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWLSNQLKN 179
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 109 bits (263), Expect = 2e-24
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = -3
Query: 731 LLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 561
LL+FAN QDLPNAM AAE+TDKLGLH+LR+R WYIQATCAT G GLYEGLDWLSNQL
Sbjct: 121 LLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWLSNQL 177
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 109 bits (263), Expect = 2e-24
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = -3
Query: 731 LLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 561
LL+FAN QDLPNAM AAE+TDKLGLH+LR+R WYIQATCAT G GLYEGLDWLSNQL
Sbjct: 121 LLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWLSNQL 177
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 84.2 bits (199), Expect = 9e-17
Identities = 35/59 (59%), Positives = 46/59 (77%)
Frame = -3
Query: 734 VLLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 558
++L+FAN QDL +AM EI DKLGL +R+RNWY+Q +CA++GDGL+EGL WLS K
Sbjct: 116 IILVFANKQDLADAMKPHEIQDKLGLTRIRDRNWYVQPSCASTGDGLHEGLTWLSQNCK 174
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3
Query: 731 LLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 558
LL+FAN QD+PNA + AE+T L L SL+NR W+I T A SG GLYEGL W+ Q+K
Sbjct: 121 LLVFANKQDMPNARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEGLMWVKKQMK 178
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 731 LLIFANXQDLPNAMNAAEITDKLGLHSLRN-RNWYIQATCATSGDGLYEGLDWLSNQL 561
+L+ AN QDLP AMN AE++ +LGL +LR R W I CA G+GL E L+W++N L
Sbjct: 121 ILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIANNL 178
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 64.5 bits (150), Expect = 7e-11
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = -3
Query: 731 LLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNA 552
+LIFAN QDL A ++ EIT KL L LR+R W+IQA A +G+ +G+ W+++ LK A
Sbjct: 122 VLIFANKQDLVTAASSEEITRKLNLDLLRDRTWHIQACSALKNEGINDGITWVASNLKPA 181
Query: 551 NR 546
++
Sbjct: 182 SK 183
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = -3
Query: 731 LLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 561
++I AN D+P AM A++IT LGL+ R+ W I +TCA +GDGL + + LS ++
Sbjct: 125 IVILANKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEI 181
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = -3
Query: 734 VLLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 558
VL + AN QD+ + E+ LGL +LRNR I T A+ G+GL +DWL+NQL+
Sbjct: 119 VLAVLANKQDIAGCLTETEVYKALGLDALRNRTIQIFKTSASKGEGLDPAMDWLANQLQ 177
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 54.8 bits (126), Expect = 6e-08
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = -3
Query: 731 LLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 561
LL+ AN DLP A++ I L LHS+++ +W I + CA SGD L + + WL + +
Sbjct: 120 LLVLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKIFSCCALSGDRLVQAMTWLCDDV 176
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -3
Query: 731 LLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 558
+L+ N +DLP A++ ++ +++ L S++NR + + + L WL + K
Sbjct: 125 VLVLGNKKDLPGALDERQLIERMNLSSIQNREICCYSISCKEKENIDITLQWLIDHSK 182
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -3
Query: 731 LLIFANXQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 558
+L+ N +DLP A++ ++ +++ L S++NR + + + L WL + K
Sbjct: 125 VLVLGNKKDLPGALDERQLIERMNLSSIQNREICCYSISCKEKENIDITLQWLIDHSK 182
>U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical
protein C17H11.1 protein.
Length = 475
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 374 MQYGTLCALKYCFSKYYINYVYLNAINGMQINSVQCLYLVAL 249
+ Y + K F YY Y+ ING I+ + C +L+ L
Sbjct: 104 IHYCLVSTTKMAFVMYYTTYIEAPFINGFLISGLYCSFLLTL 145
>AF068716-1|AAC17747.1| 247|Caenorhabditis elegans Hypothetical
protein F26D11.4 protein.
Length = 247
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 698 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSN 567
N A EI D HS WY ++T T D ++ + +LSN
Sbjct: 143 NGTTAFEIADGSSNHSYLQSAWYTESTRRTDQDIVFNCMMYLSN 186
>Z81563-3|CAB04565.1| 222|Caenorhabditis elegans Hypothetical
protein K04H8.3 protein.
Length = 222
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -1
Query: 511 IIERDYGLRYVNFIC---Y*IQCIMCGIINVLLT-RHLVTEGAPHSFRT 377
I E+ LRY NFIC + + C + + + +T R++ G P +F T
Sbjct: 105 ITEQQLNLRYYNFICSSHFHLDCKLTETLQICMTDRYVAVLGLPLAFDT 153
>Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 658 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 524
C CA T T+ A P TDCT+ + + TP + CA +
Sbjct: 91 CGFCAEETTTASTCADDPNTDCTQYTFLCSNAKYTPLLQQFCAKT 135
>Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 658 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 524
C CA T T+ A P TDCT+ + + TP + CA +
Sbjct: 91 CGFCAEETTTASTCADDPNTDCTQYTFLCSNAKYTPLLQQFCAKT 135
>U80023-10|AAG24042.1| 97|Caenorhabditis elegans Hypothetical
protein F07C4.11 protein.
Length = 97
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/58 (25%), Positives = 21/58 (36%)
Frame = -1
Query: 658 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQTNLIIERDYGLR 485
C RC + T S A + + CT + S S N C N L + + R
Sbjct: 35 CARCPSTTAASALAAAVAASSCTTYAADSSPSCAAWAKNGFCTNMSYTLAQRKSFCAR 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,223,858
Number of Sequences: 27780
Number of extensions: 367029
Number of successful extensions: 944
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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