Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_N21
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 35 0.076
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 33 0.23
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 32 0.40
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 32 0.40
04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204 31 1.2
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 30 2.2
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 29 3.8
03_05_0994 + 29541109-29542527 29 3.8
08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156... 28 6.6
07_03_1795 + 29603694-29605208,29605423-29605649,29605739-296060... 28 6.6
05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238 28 6.6
02_05_0261 + 27243898-27243938,27244068-27244157,27244293-272443... 28 6.6
01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,986... 28 6.6
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 28 8.7
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 8.7
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 28 8.7
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 28 8.7
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 34.7 bits (76), Expect = 0.076
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = -1
Query: 716 RQKAQELWECIVKLETEXYDLEERQKRQDYDL-KELKERQKQQLRHKALKKGLDPEALTG 540
R++A+EL + +L + E Q+ +D + +E+K +QK++ + K +KK D + LTG
Sbjct: 183 RKEAEELRKREEELRKRKAEEERLQREEDERMVEEMKMQQKERDKGKTMKKRQDGKTLTG 242
Query: 539 K 537
K
Sbjct: 243 K 243
>08_02_1236 + 25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 33.1 bits (72), Expect = 0.23
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = -1
Query: 668 EXYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRV- 492
E L+E +KR D+KELK ++KQ + K + +H + Q K + V
Sbjct: 970 ESISLKE-EKRLLQDIKELKAQKKQLSSNMGSKAEMGEAFEQKEHIHEQQKILKKDSDVL 1028
Query: 491 --DTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWF--GERPGKK 330
+ +S +DK + + + +D L K+ +E RQKA +WF + PG+K
Sbjct: 1029 LTNLKSLEDKTRFIKKAFDD-ERDALRKLTEEHQAAHEVRQKA-YDEWFELKKEPGRK 1084
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = -1
Query: 653 EERQKRQDYDLK--ELKERQKQQLRHKALKKGLDPEALTGK 537
EER K+++ + K E K R+K++ + K LKK + + LTGK
Sbjct: 455 EERLKKEEEERKAEEAKRRKKEREKEKLLKKKQEGKLLTGK 495
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 32.3 bits (70), Expect = 0.40
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = -1
Query: 653 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEAL-TGKHPPKIQVASKYERRVDTRSY 477
++ QK Q KELK+++K++ R + +K EAL K K + K ++R
Sbjct: 332 KDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEEAEMKKQQRKQEEEA 391
Query: 476 DDKKKLFEGDLEKLNKDFLEKVWQERAEQ 390
++K E + + K +K QE AE+
Sbjct: 392 QKEQKRREKEEAETRKQ--QKKQQEEAEK 418
>04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204
Length = 546
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 639 ETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSV 511
E GL ++ + + + T +S + SRP SAH P S V
Sbjct: 300 EKGLDWRKMETEIEQKTSRPTSSQSSRPNSAHSSRPGSPGSQV 342
>01_06_1713 -
39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = -1
Query: 686 IVKLETEXYDLEERQKRQDYDLKELKERQKQQLRHK--ALKKGLDPEALTGKHPPKIQVA 513
++ L+ + +L+ + + + YDL + R +Q HK L K L+ E K K + A
Sbjct: 699 LLPLQKKFTELKSQFELKSYDLSLFQNRVEQNEHHKLGELVKKLEQELQESKQELKAKQA 758
Query: 512 SKYERRVDTRSYDDKK-KLFEGDLEKLNKDFLEKVWQERAE 393
+YE+ V T S +K K + + E K K+ ++E
Sbjct: 759 -QYEKSVSTVSELEKTIKTYGSEREGRLKALERKIKSLKSE 798
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -1
Query: 716 RQKAQELWECIVKLETEXYDLEERQKRQDYDLKELKERQKQQLRHKA 576
RQ+A E + + ++ E E R K+ + ++KEL+ R K++L+ A
Sbjct: 778 RQRASESRQEYLAIKEEAAMQEGRAKQLEEEIKELRTRHKKELQDAA 824
>03_05_0994 + 29541109-29542527
Length = 472
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = -1
Query: 653 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPK---IQVASKYERRVDTR 483
EE++K +D + +E +E + + + + PEA PP+ + A++ + VDT
Sbjct: 223 EEQEKGKDEEQEEKEEEEVPVVTRRGRSRKAAPEAAVAPPPPRARSTRAAARRGKAVDT- 281
Query: 482 SYDDKKKLFEG 450
S D+++ G
Sbjct: 282 SLDERESEMAG 292
>08_01_0186 -
1561695-1561958,1562041-1562183,1562260-1562326,
1562417-1562529,1562603-1562671,1563831-1563870,
1563965-1564035,1565872-1566027,1566104-1566152,
1566228-1567631
Length = 791
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 648 EAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVRE 499
EAK KRA+ A A++ ++ R R A R+A Q +V + E
Sbjct: 664 EAKAAEDARKRAEAAAAAEAAAEAKRQREREREAARKALQQMEKTVDINE 713
>07_03_1795 + 29603694-29605208,29605423-29605649,29605739-29606071,
29606229-29606475,29606948-29607076,29607161-29607376,
29607454-29607577,29608377-29608612
Length = 1008
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -1
Query: 719 LRQKAQEL-WECI-VKLETEXYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEAL 546
LR++ QE W+ + V + + RQ +++ + K LRHK K L
Sbjct: 790 LRKQIQECNWQVVNVTTPANYFHVLRRQIHREFRKPLIVMAPKNLLRHKDCKSNLSEFDD 849
Query: 545 TGKHPPKIQVASKYERRVDTRSYDDKKKLFEG 450
HP + ++++R + R +D K++ EG
Sbjct: 850 VEGHPGFDKQGTRFKRLIKDR--NDHKQVEEG 879
>05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238
Length = 490
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = -3
Query: 627 RLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACRHTILRRQKETVRG* 448
R K +TKA+ EA Q+G R + R+ + + LR+++E R
Sbjct: 417 RSKTEAARTKASQEAFREQQGLRQEALQRKKAEKKKLMEEAEAKLSAEALRKKEEKERA- 475
Query: 447 PRETEQGLPREGVAR 403
R+ ++ +P+ + R
Sbjct: 476 -RQMKKSMPKVKMLR 489
>02_05_0261 +
27243898-27243938,27244068-27244157,27244293-27244350,
27244441-27244485,27244778-27244855,27244940-27245041,
27245150-27245173
Length = 145
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = -1
Query: 707 AQELWECIVKLETEXYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPP 528
A E W + + E Y + QK+QDY+ + +K+ K K D E G
Sbjct: 68 AGEKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFDKKESTSSKKAKTHDDGE---GSDKS 124
Query: 527 KIQVASKYERRVDTRSYDDKK 465
K +V + D + DD++
Sbjct: 125 KSEVDDDQDGGSDEENEDDEE 145
>01_01_1220 +
9862195-9862281,9862427-9862646,9862764-9862916,
9863016-9863674,9863749-9863852,9863950-9864192,
9864262-9864376,9864696-9864909,9864995-9865511,
9866439-9866448,9867363-9867551,9867755-9868084,
9868639-9868872,9869303-9869743
Length = 1171
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 446 GHPRTVSFCRRRIVCRHASRTWTLLEFWAG 535
GH R VS R R + H +R+W L+ +G
Sbjct: 103 GHERVVSVFRDRALELHTTRSWDFLDVQSG 132
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 599 KQQLRHKALKKGLDPEALTGKHPP 528
K+ RH KK +D +T KHPP
Sbjct: 882 KKSARHSRNKKKVDEAPVTSKHPP 905
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = -1
Query: 719 LRQKAQELWECIVKLETEXYD-----LEERQKRQDYDLKELKERQKQQLRHKALKKGLDP 555
L++ + + E I KLE D + +KRQ D L +++++ K +KG P
Sbjct: 62 LKKDPEAILEQIEKLEKMKADGALDKARKHKKRQLEDTYNLIVKKRKEYEEKMKEKGEQP 121
Query: 554 EALTGKHPPKIQVASKYERRVDTRSYDD 471
+ PPK + A++ + R +D
Sbjct: 122 IMFSHLGPPKRRPAAEEDDRAKNPKPED 149
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 37 KYFVHIHNSNKLMDWLQNCRTRPARVEGPISGASDFY 147
+++ + S+K + WL+ +T P V+G S S Y
Sbjct: 532 RFWTTLQGSSKDIGWLKRTKTLPCSVDGLFSNHSPLY 568
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -1
Query: 659 DLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRS 480
+LE +++ QD KEL E+QKQ+ K L + E K + K ++R + R
Sbjct: 631 ELERKKRSQDEKRKEL-EKQKQEEERKELDRQKQRE-----EERKAKELEKQKQREEERK 684
Query: 479 YDDKKKLFEGD 447
+K+K E D
Sbjct: 685 ALEKQKQGERD 695
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,435,856
Number of Sequences: 37544
Number of extensions: 185723
Number of successful extensions: 912
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -