Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_N16
         (383 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   1.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   2.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   2.8  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    20   8.6  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    20   8.6  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +2

Query: 209 FNDNWATVNLLYKRGQSFLTTHFLCLFIILMKFKTQSMY 325
           F  +  + N+L +R  S  +T ++ L I+LM     +++
Sbjct: 228 FTTDLLSYNILLRRHYSMNSTTYVTLTIVLMTMTLMTLW 266


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 182 TSIVNTAVQFNDNWATVNL 238
           +S  NT ++ N+N+ TVNL
Sbjct: 431 SSSSNTWLRVNENYKTVNL 449


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 182 TSIVNTAVQFNDNWATVNL 238
           +S  NT ++ N+N+ TVNL
Sbjct: 431 SSSSNTWLRVNENYKTVNL 449


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 316 KYVQCTLNETKFFN 357
           KY+ C L + KF +
Sbjct: 114 KYIDCALEKMKFLD 127


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 316 KYVQCTLNETKFFN 357
           KY+ C L + KF +
Sbjct: 114 KYIDCALEKMKFLD 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,901
Number of Sequences: 438
Number of extensions: 1633
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)