BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_N12
(688 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative odorant-b... 27 0.73
AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative transcri... 26 1.3
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 26 1.3
AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 24 3.9
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 24 5.2
AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450 CY... 24 5.2
>AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative
odorant-binding protein OBPjj17 protein.
Length = 285
Score = 26.6 bits (56), Expect = 0.73
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 532 STAIWNVLACSVYLFL---KQLVRSSPLLMLXSQFSLRPECCDEXNVVNRCTER 684
S+++W ++ C+V + ++L+R + F ECC + +NR R
Sbjct: 18 SSSVWLIVVCAVTVASANSEELLRGKENCLRHDDFPSPNECCSKPQWINRYAVR 71
>AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative
transcription factor protein.
Length = 319
Score = 25.8 bits (54), Expect = 1.3
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = -3
Query: 578 KNRYTLQASTFQMAVLLQYNDNTSWTVRQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDE 399
K R+ + Q+ L D T + L + IK D + +++ K + ++ +
Sbjct: 187 KRRHRTIFTEEQLEQLEATFDKTHYPDVLLREKLAIKVDLKEERVEVWFKNRRAKWRKQK 246
Query: 398 AELGENSVVDLYSGYK-NKKLRVNINIPLKTELKVEQEAT 282
E E +S Y+ N K+R INIP+ + K+ Q T
Sbjct: 247 REEQEQ-----FSNYEINSKIRKLINIPVSAQEKLRQLQT 281
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 25.8 bits (54), Expect = 1.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 258 KDAYTGRHSTDNENAQDPEASALSGG 181
K+ TG ST + +DPE +A+ GG
Sbjct: 888 KEDATGGFSTTTTSPKDPEEAAVGGG 913
>AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein.
Length = 165
Score = 24.2 bits (50), Expect = 3.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 603 GGTPHQLLQEQVHAAGEHVP 544
G PHQ L QVH + VP
Sbjct: 14 GANPHQTLTTQVHPSQPPVP 33
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 23.8 bits (49), Expect = 5.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 588 QLLQEQVHAAGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLP 457
++++E + + + A L GP GAA RH+R P
Sbjct: 295 EVIKEAIRVRQQELRGPEAVREAAGRLRTGPVPGAAERHRRRRP 338
>AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450
CYP6P2 protein.
Length = 507
Score = 23.8 bits (49), Expect = 5.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 503 TVRQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGE 384
TV E++ + DFL +LQI KL +ED GE
Sbjct: 255 TVEYRERNNVKRNDFLNLLLQIKNTGKLWEGEEDHIGKGE 294
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,707
Number of Sequences: 2352
Number of extensions: 14937
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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