Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_N12
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical pr... 175 2e-44
U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein. 175 2e-44
Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical pr... 164 5e-41
Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical pr... 164 5e-41
Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical pr... 164 5e-41
Z92822-5|CAD45612.3| 743|Caenorhabditis elegans Hypothetical pr... 160 1e-39
U58084-1|AAC47121.1| 743|Caenorhabditis elegans CUL-2 protein. 158 4e-39
Z77666-5|CAB01230.1| 729|Caenorhabditis elegans Hypothetical pr... 150 1e-36
AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protei... 104 1e-23
U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein. 95 3e-20
U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein ... 95 3e-20
U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein. 95 4e-20
Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 91 9e-19
Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 31 0.58
AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical ... 31 0.77
AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical ... 31 1.0
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 30 1.3
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 30 1.8
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 29 2.4
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 29 3.1
Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 4.1
U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical pr... 29 4.1
U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family pr... 29 4.1
AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical... 29 4.1
AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical ... 29 4.1
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 5.4
U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned expre... 28 5.4
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical pr... 28 7.2
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 28 7.2
U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical pr... 28 7.2
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 28 7.2
Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 27 9.5
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 27 9.5
>Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical protein
D2045.6 protein.
Length = 780
Score = 175 bits (426), Expect = 2e-44
Identities = 88/215 (40%), Positives = 134/215 (62%), Gaps = 4/215 (1%)
Frame = -3
Query: 683 RSVHRFTTXYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSW 504
+++ F Y+ + +GR+L W+Y+ S+GE+ + F +Y A+T QM +L +N+ S+
Sbjct: 566 KTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSY 625
Query: 503 TVRQLEQHTGIKGDFLIQVLQILLKAKLLVCQED---EAELGENSVVDLYSGYKNKKLRV 333
TV Q+ T + ++ L+K +L + E E+ + V L Y NKK+RV
Sbjct: 626 TVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKAYMNKKVRV 685
Query: 332 NIN-IPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSR 156
+++ +K + + E K++EEDRK +I A IVRIMKTRK ++HQ L+ EV+ QLS R
Sbjct: 686 DLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGR 745
Query: 155 FKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
FKP+V +IK+CI LIEKEY+ RTEG+KD Y YLA
Sbjct: 746 FKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
>U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein.
Length = 780
Score = 175 bits (426), Expect = 2e-44
Identities = 88/215 (40%), Positives = 134/215 (62%), Gaps = 4/215 (1%)
Frame = -3
Query: 683 RSVHRFTTXYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSW 504
+++ F Y+ + +GR+L W+Y+ S+GE+ + F +Y A+T QM +L +N+ S+
Sbjct: 566 KTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSY 625
Query: 503 TVRQLEQHTGIKGDFLIQVLQILLKAKLLVCQED---EAELGENSVVDLYSGYKNKKLRV 333
TV Q+ T + ++ L+K +L + E E+ + V L Y NKK+RV
Sbjct: 626 TVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKAYMNKKVRV 685
Query: 332 NIN-IPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSR 156
+++ +K + + E K++EEDRK +I A IVRIMKTRK ++HQ L+ EV+ QLS R
Sbjct: 686 DLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGR 745
Query: 155 FKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
FKP+V +IK+CI LIEKEY+ RTEG+KD Y YLA
Sbjct: 746 FKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
>Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical protein
ZK520.4c protein.
Length = 791
Score = 164 bits (399), Expect = 5e-41
Identities = 81/210 (38%), Positives = 126/210 (60%), Gaps = 1/210 (0%)
Frame = -3
Query: 677 VHRFTTXYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSWTV 498
+ F Y+ +H+GRKL WL+NMS+G++ +Y Q +QMA LL + + V
Sbjct: 585 IQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILV 644
Query: 497 RQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP 318
+ + + G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P
Sbjct: 645 KDIGEEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAP 702
Query: 317 -LKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRV 141
+ ++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P V
Sbjct: 703 QVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDV 762
Query: 140 PVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
P IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 763 PFIKKSIEDLIEKMYIQRTD-QNDEYQYLA 791
>Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical protein
ZK520.4b protein.
Length = 774
Score = 164 bits (399), Expect = 5e-41
Identities = 81/210 (38%), Positives = 126/210 (60%), Gaps = 1/210 (0%)
Frame = -3
Query: 677 VHRFTTXYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSWTV 498
+ F Y+ +H+GRKL WL+NMS+G++ +Y Q +QMA LL + + V
Sbjct: 568 IQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILV 627
Query: 497 RQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP 318
+ + + G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P
Sbjct: 628 KDIGEEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAP 685
Query: 317 -LKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRV 141
+ ++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P V
Sbjct: 686 QVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDV 745
Query: 140 PVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
P IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 746 PFIKKSIEDLIEKMYIQRTD-QNDEYQYLA 774
>Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical protein
ZK520.4a protein.
Length = 850
Score = 164 bits (399), Expect = 5e-41
Identities = 81/210 (38%), Positives = 126/210 (60%), Gaps = 1/210 (0%)
Frame = -3
Query: 677 VHRFTTXYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSWTV 498
+ F Y+ +H+GRKL WL+NMS+G++ +Y Q +QMA LL + + V
Sbjct: 644 IQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILV 703
Query: 497 RQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP 318
+ + + G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P
Sbjct: 704 KDIGEEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAP 761
Query: 317 -LKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRV 141
+ ++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P V
Sbjct: 762 QVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDV 821
Query: 140 PVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
P IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 822 PFIKKSIEDLIEKMYIQRTD-QNDEYQYLA 850
>Z92822-5|CAD45612.3| 743|Caenorhabditis elegans Hypothetical protein
ZK520.4d protein.
Length = 743
Score = 160 bits (388), Expect = 1e-39
Identities = 81/212 (38%), Positives = 126/212 (59%), Gaps = 3/212 (1%)
Frame = -3
Query: 677 VHRFTTXYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSWTV 498
+ F Y+ +H+GRKL WL+NMS+G++ +Y Q +QMA LL + + V
Sbjct: 535 IQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILV 594
Query: 497 RQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP 318
+ + + G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P
Sbjct: 595 KDIGEEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAP 652
Query: 317 -LKTELKVEQEATHK--HIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKP 147
+ ++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P
Sbjct: 653 QVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSP 712
Query: 146 RVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
VP IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 713 DVPFIKKSIEDLIEKMYIQRTD-QNDEYQYLA 743
>U58084-1|AAC47121.1| 743|Caenorhabditis elegans CUL-2 protein.
Length = 743
Score = 158 bits (383), Expect = 4e-39
Identities = 80/212 (37%), Positives = 126/212 (59%), Gaps = 3/212 (1%)
Frame = -3
Query: 677 VHRFTTXYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSWTV 498
+ F Y+ +H+GRKL WL+NMS+G++ ++ Q +QMA LL + + V
Sbjct: 535 IQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQHVAQMYVYQMAALLCFERRDAILV 594
Query: 497 RQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP 318
+ + + G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P
Sbjct: 595 KDIGEEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAP 652
Query: 317 -LKTELKVEQEATHK--HIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKP 147
+ ++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P
Sbjct: 653 QVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSP 712
Query: 146 RVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
VP IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 713 DVPFIKKSIEDLIEKMYIQRTD-QNDEYQYLA 743
>Z77666-5|CAB01230.1| 729|Caenorhabditis elegans Hypothetical protein
K08E7.7 protein.
Length = 729
Score = 150 bits (363), Expect = 1e-36
Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 5/211 (2%)
Frame = -3
Query: 668 FTTXYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSWTVRQL 489
F T Y++ H+GR+LNW Y+ +GE+ + F+ +Y + Q+ L +N+ S+T+ Q+
Sbjct: 519 FDTFYNASHNGRRLNWAYSQCRGEVNSKAFEKKYVFIVTASQLCTLYLFNEQDSFTIEQI 578
Query: 488 E---QHTGIKGDFLIQVLQILLKAKLLVCQEDEAE-LGENSVVDLYSGYKNKKLRVNINI 321
+ T ++ L ++ L+V + +E + ++VV L + Y NKK+RV++
Sbjct: 579 SKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKDGYPPDAVVSLNTKYANKKVRVDLTT 638
Query: 320 PLK-TELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPR 144
+K E +A +E DRK I+A IVRIMKTRK+L H L+ E+++QL SRF P
Sbjct: 639 AIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPN 698
Query: 143 VPVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
V +IK CI+ILIE+ Y+ R+E E + Y YLA
Sbjct: 699 VQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
>AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protein 3
protein.
Length = 777
Score = 104 bits (249), Expect(2) = 1e-23
Identities = 70/194 (36%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
Frame = -3
Query: 608 SKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSWTVRQLEQHTGIKGDFLIQVLQILLK 429
S GE + LQ +T QM +LLQ+N + + +QL I L + LQ L
Sbjct: 586 SSGESMKERKPEHKILQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLAL 645
Query: 428 AK----LLVCQ---EDEAELGENSVVDLYSGYKNKKLRVNINIPL-KTELKVEQEATHKH 273
K +LV + +D ++ + V+ +++K RV + + K E + E T +
Sbjct: 646 GKASQRILVRKNKGKDAIDMSDEFAVN--DNFQSKLTRVKVQMVTGKVESEPEIRETRQK 703
Query: 272 IEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYL 93
+E+DRK+ ++AAIVRIMK RK L H +LV EV QL RF P +IK+ I+ LIE+EYL
Sbjct: 704 VEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYL 763
Query: 92 ERTEGEKDTYSYLA 51
R E + Y Y+A
Sbjct: 764 ARDEHDHRAYQYIA 777
Score = 23.0 bits (47), Expect(2) = 1e-23
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 668 FTTXYSSQHSGRKL 627
FT Y+ +H+GRKL
Sbjct: 539 FTQYYTEKHTGRKL 552
>U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein.
Length = 803
Score = 95.5 bits (227), Expect = 3e-20
Identities = 71/217 (32%), Positives = 116/217 (53%), Gaps = 15/217 (6%)
Frame = -3
Query: 656 YSSQHSGRKLNWLYNMSKGELLTNCFKN--RYTLQASTFQMAVLLQYNDNTSWTVRQLEQ 483
Y QH R + W + ++ +++ F+ + L A+ +Q +LL +N +WTV ++ +
Sbjct: 591 YRVQHGNRNVKWHHGLASA-VISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEIVE 649
Query: 482 HTGIKGDFLIQVLQILL--KAKLLVCQEDE---AELGENSVVDLY-------SGYKNKKL 339
HT I +++ + LL + K V Q E +E E +V +L S + K+
Sbjct: 650 HTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEKRC 709
Query: 338 RVNI-NIPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLS 162
RV I + +KT ++ E + + + DR+ I AA+VRIMK RK L HQ L+ E+L QL
Sbjct: 710 RVRIAQVNIKTAVE-ETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQL- 767
Query: 161 SRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
RF IKK ++ LIE+EY+ R E +Y+Y+A
Sbjct: 768 -RFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 803
>U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein 4
protein.
Length = 840
Score = 95.5 bits (227), Expect = 3e-20
Identities = 71/217 (32%), Positives = 116/217 (53%), Gaps = 15/217 (6%)
Frame = -3
Query: 656 YSSQHSGRKLNWLYNMSKGELLTNCFKN--RYTLQASTFQMAVLLQYNDNTSWTVRQLEQ 483
Y QH R + W + ++ +++ F+ + L A+ +Q +LL +N +WTV ++ +
Sbjct: 628 YRVQHGNRNVKWHHGLASA-VISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEIVE 686
Query: 482 HTGIKGDFLIQVLQILL--KAKLLVCQEDE---AELGENSVVDLY-------SGYKNKKL 339
HT I +++ + LL + K V Q E +E E +V +L S + K+
Sbjct: 687 HTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEKRC 746
Query: 338 RVNI-NIPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLS 162
RV I + +KT ++ E + + + DR+ I AA+VRIMK RK L HQ L+ E+L QL
Sbjct: 747 RVRIAQVNIKTAVE-ETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQL- 804
Query: 161 SRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
RF IKK ++ LIE+EY+ R E +Y+Y+A
Sbjct: 805 -RFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
>U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein.
Length = 780
Score = 95.1 bits (226), Expect = 4e-20
Identities = 67/182 (36%), Positives = 99/182 (54%), Gaps = 11/182 (6%)
Frame = -3
Query: 563 LQASTFQMAVLLQYNDNTSWTVR---QLEQHTGIKGDFLIQVLQILLKAK----LLVCQ- 408
LQ +T QM +LLQ N + + + QL I L + LQ L K +LV +
Sbjct: 601 LQVNTHQMIILLQLNHHNRISCQHEQQLMDELKIPERELKRNLQSLALGKASQRILVRKN 660
Query: 407 --EDEAELGENSVVDLYSGYKNKKLRVNINIPL-KTELKVEQEATHKHIEEDRKMLIQAA 237
+D ++ + V+ +++K RV + + K E + E T + +E+DRK+ ++AA
Sbjct: 661 KGKDAIDMSDEFAVN--DNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAA 718
Query: 236 IVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSY 57
IVRIMK RK L H +LV EV QL RF P +IK+ I+ LIE+EYL R E + Y Y
Sbjct: 719 IVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQY 778
Query: 56 LA 51
+A
Sbjct: 779 IA 780
>Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical protein
ZK856.1 protein.
Length = 765
Score = 90.6 bits (215), Expect = 9e-19
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 20/232 (8%)
Frame = -3
Query: 686 ERSVHRFTTXYSSQHSGRKLNWLYNMSKGELLTNCFKN-RYTLQASTFQMAVLLQYNDNT 510
E V Y QH+GRKL W+++ S G ++ R+ L+ +TFQMAVL +ND
Sbjct: 534 EDFVPEMEAFYKKQHNGRKLCWMHHWSSGTMVFGTANGGRFDLECTTFQMAVLFCFNDRA 593
Query: 509 --SWTVRQLEQHTGIKGDFLIQVLQIL-----LKAKLLVCQEDEAELGENSVVD------ 369
++ L T + L + L L ++ ++L+C + D
Sbjct: 594 HDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARDFTDSTKFLI 653
Query: 368 ------LYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKT 207
+ +G ++ +VN+ L+ L+ E H+ I R++ +Q IV+I+KTRKT
Sbjct: 654 NHDFNVVKNGKSQQRGKVNLIGRLQLSLEANAEKEHESIVALRELRVQEGIVKILKTRKT 713
Query: 206 LKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 51
L +E++ L F P +IK+ ID LIE +Y+ER + +T+ Y++
Sbjct: 714 YTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRADDINTFVYIS 765
>Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical
protein F46F3.4 protein.
Length = 769
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -3
Query: 290 EATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSR--FKPRVPV 135
++ +KH+EE + AA +++ RK +HQ L+ NQ+S++ +PR V
Sbjct: 213 QSLNKHLEEMYRRRQTAAAAALVEQRKMQQHQILLARAANQVSTQEVIRPRASV 266
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 31.5 bits (68), Expect = 0.58
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = -3
Query: 389 GENSVVDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRK 210
GE+ + N K ++N LK EL + A HK I +D++ I+ RIMK +
Sbjct: 397 GESEQTLIEKVKNNSKAVASLNAQLKNELSYTK-AVHKRILKDKEQCIEELENRIMKL-E 454
Query: 209 TLK 201
TLK
Sbjct: 455 TLK 457
>AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical
protein Y71G12A.2 protein.
Length = 611
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 481 CCSSWRTVHEVLSLYCSSTAIWNVLACSVYLFLKQLVRSSPLLMLXSQFSLRPE 642
CC +W TV E LS+ + ++ V L L R L +L Q L PE
Sbjct: 404 CCWTWWTVSESLSICQLLCDVSHLNVAPVILSRLHLARFDALFVLAKQLKLNPE 457
>AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical
protein Y40B1B.7 protein.
Length = 123
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 314 KTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQ 195
K E KVEQE + +E +RK I I +I K +KT K Q
Sbjct: 72 KKERKVEQEK--RRLENERKAEIVQKITKIHKLKKTKKRQ 109
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = -3
Query: 353 KNKK-LRVNINIPLKTEL-KVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVE 180
KN++ L+ N+ + + + K E+ K +EE K + + + + RKT++ E
Sbjct: 850 KNEEALKENLKLSMLLDREKSEKVKVQKELEEVEKQGREKLLEKEREFRKTMEEMEQNEE 909
Query: 179 VLNQLSSRFKPRVPVIKKCIDILIEKE-YLERTEGEK 72
+ N L ++ + + K D+L E E +E+ EK
Sbjct: 910 IFNVLERKYNEQHKKVMKMNDVLREYERKIEQLNMEK 946
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 603 GGTPHQLLQEQVHAAGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGASN 439
G P Q H++ EH+ + + V Q V P A H+ +PH+ A++
Sbjct: 695 GEVPQSPSSNQFHSS-EHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAAS 748
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 29.5 bits (63), Expect = 2.4
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Frame = -3
Query: 488 EQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIPLKT 309
E+ D + + +L K K+ + +E E L E ++V+ K + L+ K
Sbjct: 200 ERKISNSSDEIFSLQDLLGKTKVQLEEETEKVLQERTIVE---NLKAQFLKERKESTEKI 256
Query: 308 EL-KVEQEATHKHIEEDRKMLIQAAIVRI----MKTRKTLKHQHLVVEVLNQLSSRFKPR 144
EL + E E K IEED + Q + K T+ HQ+ V+E L Q + +
Sbjct: 257 ELIQKEAEDYRKRIEEDIRNRQQRHKKEVDAHQEKFSATVNHQNAVIEELTQTVKQKQSE 316
Query: 143 VPVIK 129
+ +K
Sbjct: 317 IAELK 321
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = -3
Query: 386 ENSVVDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAA-IVRIMK-TR 213
E V +L K+ +L + + + EL+ + TH +EE K L A +R+M+ T
Sbjct: 18 ERRVTELQDENKSLRLTLALRTDCEHELERVRNETHPGVEELEKKLASAENEIRVMESTN 77
Query: 212 KTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYS 60
K L + +QL + R ++K ++ E E +E + Y+
Sbjct: 78 KEL--MATLATTRDQLGKMLRERNQLVKDVDELHEEIEKMESLYNKPADYA 126
>Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 410 QEDEAELGENSV-VDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAI 234
+EDE E E V S K K R+ KT K E+EA + +EE+++ AA+
Sbjct: 345 EEDEEESEEKEEKVKGKSNQKTVKERIRAEEARKTVEKEEEEAEEEAVEEEKEEKAAAAV 404
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 4.1
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -3
Query: 464 DFLIQVLQILLKAKLLVCQ--EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTEL-KVE 294
+F +Q+ + K ++L + E EA+L + D N +L + L+ +L +
Sbjct: 1694 EFAVQMDKYREKCEVLTAKIAELEAQLQNPAEEDQQQKTSNVEL-----VKLRQQLANAQ 1748
Query: 293 QEATHKHIE-EDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPV 135
Q+ +++ DR+ LI +I + KT++ HL ++ + + R PRVP+
Sbjct: 1749 QDMRVQNLTISDREGLIAEYRHQIAEQTKTIEELHLKLKTFSAAARRTSPRVPM 1802
>U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical
protein F07C3.3 protein.
Length = 791
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 224 MKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLE-RTEGEKDTYSY 57
M +KTL+ V+ N KP VP+ KK + +K E KD YSY
Sbjct: 233 MFIKKTLEVNAFVINCYNHSKKAVKPEVPIWKKPFPGMKDKNLPEDEILRVKDLYSY 289
>U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family
protein 2 protein.
Length = 423
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 308 PSSTVCLYSRAAFCSCTPSRDRQPSSRQAQPRPLDTPTVS 427
P T L + + S + S D +P+ ++ +P P TPT S
Sbjct: 267 PGKTASLPTHSPHPSESNSEDDEPTLKKCKPEPSQTPTTS 306
>AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical
protein Y48B6A.11 protein.
Length = 922
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 477 GVLLQLADRPRGVVVVLQQHRH---LERARLQRVPVLEAVGEEFPLAHVVXPVQ--LAPG 641
G + ++ D PRGVV++ +H H + + Q+ VG+ + VV P Q G
Sbjct: 763 GFVCEVRDYPRGVVMICHKHEHSYLVNKTTQQQAYTNVKVGDFVFVEDVVEPPQKLFTRG 822
Query: 642 VLRRVXRGEPV 674
+ R + E V
Sbjct: 823 AIVRADKKETV 833
>AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 410 QEDEAELGENSV-VDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAI 234
+EDE E E V S K K R+ KT K E+EA + +EE+++ AA+
Sbjct: 345 EEDEEESEEKEEKVKGKSNQKTVKERIRAEEARKTVEKEEEEAEEEAVEEEKEEKAAAAV 404
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 207 PEASALSGGSPQPVVVTVQAQSSCHQEMYRYTD*EGIFRAHRGREGHLQLPG 52
P+A+A + Q QAQ++ Q+ + + E A R G PG
Sbjct: 339 PQAAAAQHAAQQQAAAQAQAQAAAQQQQQQQREQEAAAAAQRNGAGRATTPG 390
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 207 PEASALSGGSPQPVVVTVQAQSSCHQEMYRYTD*EGIFRAHRGREGHLQLPG 52
P+A+A + Q QAQ++ Q+ + + E A R G PG
Sbjct: 339 PQAAAAQHAAQQQAAAQAQAQAAAQQQQQQQREQEAAAAAQRNGAGRATTPG 390
>U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned
expression site protein 8 protein.
Length = 467
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/58 (27%), Positives = 21/58 (36%)
Frame = -2
Query: 561 AGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGASNIIEGETVGVSRGRG*AW 388
AG +P G ++ PP G H PH ++ VG G G AW
Sbjct: 144 AGYAMPMGAYPIPIPPNIYPTPPFGGFHMPPHSPPHVQPPPVVNPGAVGTYTGYGGAW 201
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical
protein W05B2.4 protein.
Length = 2265
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/63 (23%), Positives = 35/63 (55%)
Frame = -3
Query: 290 EATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDIL 111
E H H++ +R++L+++ + MK R +++ ++ +N+L +P IKK ++
Sbjct: 170 EKYHHHVKNNREILLRSQSLAAMKIRIFFENRKGLIFEVNELIDPEVGNIP-IKKFREVT 228
Query: 110 IEK 102
+ K
Sbjct: 229 LTK 231
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 203 KHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEY 96
KH V EV N L S P++ KK I + + EY
Sbjct: 868 KHMKFVYEVRNLLESTAGPKIDTSKKGIVLQVTPEY 903
>Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical
protein F25H2.1 protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -3
Query: 461 FLIQVLQILLKAKLLVCQEDEAELGENSVVDLY-SGYKNKKLRVNINIPLKTELKVEQEA 285
F I V ++ LKAK+ V + + + E+ +D Y SG + + VN I + + KV +A
Sbjct: 254 FRINVSKLSLKAKVTVKEFTKNKRKEHYTIDAYVSG--SPYVFVNKKIGKRWKFKVHSDA 311
Query: 284 THKHIEE 264
+K I E
Sbjct: 312 HNKTISE 318
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 650 SQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLL 528
++H+G ++W Y LLT C RYTLQ T+ A L
Sbjct: 388 NEHNGTWIDWQYLHKSVSLLTKC---RYTLQ-YTYPFAYFL 424
>U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical
protein C16A3.4 protein.
Length = 375
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = -3
Query: 185 VEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA*SRHAQEER 24
+E+ N+ ++ F P PV+ ++ L K + + E ++A +H + E+
Sbjct: 47 IELFNEKAASFNPTKPVVAASVEPLYCKACRKSIKSENAMTDHVASKKHKENEK 100
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 203 KHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEY 96
KH V EV N L S P++ KK I + + EY
Sbjct: 868 KHMKFVYEVRNLLESTAGPKIDTSKKGIVLQVTPEY 903
>Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical
protein F39H11.3 protein.
Length = 588
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 600 GTPHQLLQEQVHAAGEHVPDGGAAAVQRQHLVDGPPA 490
G PHQ++Q+Q H H+ G + + +GP A
Sbjct: 433 GHPHQMMQQQQHPQQHHMQYQGMHDPMQGGMDEGPQA 469
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical
protein R09E10.5 protein.
Length = 1459
Score = 27.5 bits (58), Expect = 9.5
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 225 YPYYGGLYKHLSVLLNVFV 281
+PYYGGLY + ++ +N ++
Sbjct: 117 FPYYGGLYNYTTISVNGYL 135
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.5
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -3
Query: 407 EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTELKV----EQEATHKHIEEDRKM---L 249
E+ L E + L S N+ LR I + L V ++ + I+ + K+ L
Sbjct: 159 ENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRL 218
Query: 248 IQAAIVRIMKTRKTLKHQHLVVEVLNQ----LSSRFKPRVPVIKKCIDILIEKEYLERTE 81
+V+ + KT+ H + E+ N L+ F+P P K +DI +++ +
Sbjct: 219 EDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRD 278
Query: 80 GEKDTY 63
E++T+
Sbjct: 279 YERETF 284
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.5
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -3
Query: 407 EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTELKV----EQEATHKHIEEDRKM---L 249
E+ L E + L S N+ LR I + L V ++ + I+ + K+ L
Sbjct: 159 ENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRL 218
Query: 248 IQAAIVRIMKTRKTLKHQHLVVEVLNQ----LSSRFKPRVPVIKKCIDILIEKEYLERTE 81
+V+ + KT+ H + E+ N L+ F+P P K +DI +++ +
Sbjct: 219 EDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRD 278
Query: 80 GEKDTY 63
E++T+
Sbjct: 279 YERETF 284
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.5
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -3
Query: 407 EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTELKV----EQEATHKHIEEDRKM---L 249
E+ L E + L S N+ LR I + L V ++ + I+ + K+ L
Sbjct: 159 ENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRL 218
Query: 248 IQAAIVRIMKTRKTLKHQHLVVEVLNQ----LSSRFKPRVPVIKKCIDILIEKEYLERTE 81
+V+ + KT+ H + E+ N L+ F+P P K +DI +++ +
Sbjct: 219 EDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRD 278
Query: 80 GEKDTY 63
E++T+
Sbjct: 279 YERETF 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,020,573
Number of Sequences: 27780
Number of extensions: 336324
Number of successful extensions: 1342
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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