Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_N10
(495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical ... 104 3e-23
U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family pr... 38 0.004
Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical pr... 36 0.021
AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family ... 30 0.80
Z35641-2|CAA84707.2| 389|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF269063-1|AAG36940.1| 389|Caenorhabditis elegans core1 UDP-gal... 29 2.4
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 28 4.3
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 28 4.3
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 28 4.3
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 28 4.3
U80023-6|AAG24045.1| 306|Caenorhabditis elegans Serpentine rece... 27 5.7
Z79753-1|CAB02086.1| 249|Caenorhabditis elegans Hypothetical pr... 27 9.9
AC024791-26|AAK29889.1| 421|Caenorhabditis elegans Hypothetical... 27 9.9
>AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical
protein Y37H9A.6 protein.
Length = 138
Score = 104 bits (250), Expect = 3e-23
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = -3
Query: 409 LRAAGLVIFRNYNQIIQFLLLQTSYGEHHWTPPKGHVDPGETDWMTALRETKEEAGLCED 230
++AAGLVI+R I+FLLLQ SY HHWTPPKGHVDPGE +W A+RETKEEA + ++
Sbjct: 3 VKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKE 62
Query: 229 HLDIYKDINKTLNYE 185
L I++D ++TL YE
Sbjct: 63 QLTIHEDCHETLFYE 77
Score = 61.7 bits (143), Expect = 3e-10
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = -1
Query: 177 GEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSLQEAQEISKYEDMRQLLAEF 19
G+PK+V YWLAKL NP+ V LS EHQ+ KW L++A +I+ Y +M LL +F
Sbjct: 80 GKPKSVKYWLAKLNNPDD-VQLSHEHQNWKWCELEDAIKIADYAEMGSLLRKF 131
>U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family
protein 3 protein.
Length = 188
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -3
Query: 313 PKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTL 194
P G +DPGET TALRET EE G+ + ++I+ + +
Sbjct: 35 PGGRMDPGETTTETALRETFEEIGVNAESVEIWGHLKSVI 74
>Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical
protein T26E3.2 protein.
Length = 365
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3
Query: 400 AGLVIFRNYNQIIQFLLLQTSYGEHH--WTPPKGHVDPGETDWMTALRETKEEAGLCEDH 227
A +I RN + LL+Q + W P G V+ GET +RE KEE G D
Sbjct: 76 AAAIILRNQGDDTEVLLIQEAKKSCRGKWYMPAGRVEAGETIEEAVVREVKEETGYSCDV 135
Query: 226 LDI 218
+++
Sbjct: 136 VEL 138
>AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family
protein 2 protein.
Length = 223
Score = 30.3 bits (65), Expect = 0.80
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 313 PKGHVDPGETDWMTALRETKEEAG 242
P G +D GET A+RE KEE G
Sbjct: 109 PAGLIDAGETAQQAAIRELKEETG 132
>Z35641-2|CAA84707.2| 389|Caenorhabditis elegans Hypothetical
protein C38H2.2 protein.
Length = 389
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -3
Query: 331 EHHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNY 188
EHH +P GHVDP W + C D+ + +N L Y
Sbjct: 292 EHHLSP--GHVDPKFWFWQYTYYPMDQGPTCCSDYAVSFHYVNPNLMY 337
>AF269063-1|AAG36940.1| 389|Caenorhabditis elegans core1
UDP-galactose:N-acetylgalactosamine-alpha-R beta
1,3-galactosyltransferase protein.
Length = 389
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -3
Query: 331 EHHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNY 188
EHH +P GHVDP W + C D+ + +N L Y
Sbjct: 292 EHHLSP--GHVDPKFWFWQYTYYPMDQGPTCCSDYAVSFHYVNPNLMY 337
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 355 LLLQTSYGE-HHWTPPKGHVDPGETDWMTALRETKEEAG 242
+L+Q+ + + +W PKG ++ E A+RET EE G
Sbjct: 256 VLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 294
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 355 LLLQTSYGE-HHWTPPKGHVDPGETDWMTALRETKEEAG 242
+L+Q+ + + +W PKG ++ E A+RET EE G
Sbjct: 279 VLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 317
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 355 LLLQTSYGE-HHWTPPKGHVDPGETDWMTALRETKEEAG 242
+L+Q+ + + +W PKG ++ E A+RET EE G
Sbjct: 240 VLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 278
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 355 LLLQTSYGE-HHWTPPKGHVDPGETDWMTALRETKEEAG 242
+L+Q+ + + +W PKG ++ E A+RET EE G
Sbjct: 256 VLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 294
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 355 LLLQTSYGE-HHWTPPKGHVDPGETDWMTALRETKEEAG 242
+L+Q+ + + +W PKG ++ E A+RET EE G
Sbjct: 279 VLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 317
>U80023-6|AAG24045.1| 306|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 29 protein.
Length = 306
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 420 LCLL*EPQVWLFSEIIIKLYNSYYCKHPTENII 322
LCLL VW+ S I + Y Y + P +N++
Sbjct: 92 LCLLEYNLVWMISSYIFRYYILYVREPPIKNLV 124
>Z79753-1|CAB02086.1| 249|Caenorhabditis elegans Hypothetical
protein F20G2.1 protein.
Length = 249
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -2
Query: 428 NRSYVFFKSRRFGYFQKL*SNYTIPITANILRRTSLDTTKRTC 300
NRS + S G K+ ++Y IP+ A + +++L++ ++C
Sbjct: 143 NRSAIINISSTAGSITKIDASYNIPLVAYRMSKSALNSFGKSC 185
>AC024791-26|AAK29889.1| 421|Caenorhabditis elegans Hypothetical
protein Y47G6A.27 protein.
Length = 421
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Frame = -3
Query: 448 LC-KN*NKIEVMSSLRAAGLVIFRNYNQIIQFLLLQTSYGEHHWTP-----PKGHVDPGE 287
LC K+ ++ +SS R + + Q L++ S+GE+H TP K
Sbjct: 56 LCWKSARRMSFVSSTRLQTSPLLMEFKQSTWLPLIRQSFGEYHKTPVILVGNKSDGTANN 115
Query: 286 TDWMTALRETKEEAGLC 236
TD + + E E C
Sbjct: 116 TDKILPIMEANTEVETC 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,268,008
Number of Sequences: 27780
Number of extensions: 219054
Number of successful extensions: 573
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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