Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_N02
         (676 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-P...    29   4.4  
AE013599-1305|AAM68739.2|  247|Drosophila melanogaster CG30026-P...    29   7.7  

>AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-PA
           protein.
          Length = 1977

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = +3

Query: 306 IFFMFHINNPIRIQFVTGIMLSILTQHPVHLFLGSLANIAIEKV 437
           ++FMFH +  +R +  T I   +  Q   + +L + +N+ +E +
Sbjct: 660 VYFMFHPDGEVRSEATTTIAYVLQCQEQTNRYLPTASNVPVEHI 703


>AE013599-1305|AAM68739.2|  247|Drosophila melanogaster CG30026-PA
           protein.
          Length = 247

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 258 NDLWTTQNKCVKALVLIFFMFHINNPIRIQFVTGIMLSILTQHP 389
           +D +    KC+K ++ + F       IR QFVT     I T+ P
Sbjct: 177 SDCYGMCGKCIKCIIYVIFKLQEWVGIRRQFVTAAATMIKTESP 220


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,815,645
Number of Sequences: 53049
Number of extensions: 332576
Number of successful extensions: 498
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)