Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_M20
(472 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0686 + 19457832-19457870,19458021-19458107,19459311-194593... 118 2e-27
08_02_1399 + 26771106-26771171,26772004-26772111,26772218-267722... 107 6e-24
12_02_1121 + 26233881-26234000,26234138-26234175,26235840-26236812 79 1e-15
03_05_0477 + 24707460-24707553,24707644-24707711,24707857-247079... 77 7e-15
07_01_0503 - 3751028-3751063,3751145-3751231,3751333-3751410,375... 74 5e-14
06_01_0313 - 2250312-2250516,2250585-2250610,2250792-2251076,225... 35 0.029
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141... 34 0.050
07_01_0646 + 4853546-4853623,4853732-4855357,4855467-4855751,485... 33 0.15
10_08_0440 + 17930970-17931297,17931682-17931905,17932439-179324... 30 1.1
07_03_1217 - 24943466-24943828,24944207-24944374,24944941-249450... 29 1.9
11_01_0595 + 4732330-4732723,4732839-4732903,4733023-4733143,473... 29 2.5
04_04_0318 + 24347364-24348826,24348920-24349048,24349158-243492... 28 3.3
07_03_1197 + 24719746-24720081,24721726-24721976,24722065-247222... 27 5.8
04_04_0503 - 25701050-25701343,25701431-25701528,25701629-257016... 27 7.6
>09_04_0686 +
19457832-19457870,19458021-19458107,19459311-19459391,
19459463-19459489,19459589-19459651,19459768-19459854,
19460290-19460415,19460827-19460960,19461037-19461109,
19461307-19461372,19461778-19461816,19461927-19462051,
19462131-19462245,19463109-19463141,19463525-19463593
Length = 387
Score = 118 bits (284), Expect = 2e-27
Identities = 60/112 (53%), Positives = 79/112 (70%)
Frame = -2
Query: 471 KVEREGRHITXVCAGRGTDTALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKTH 292
K+EREG+ +T + AL+AA+ L+ +GI EV+NLR+IRP+D TI S+ KT+
Sbjct: 239 KIEREGKDVTITAYSKMVGYALQAADILS-KEGISAEVINLRSIRPLDRATINASVRKTN 297
Query: 291 HLITVEQGWPQSGIGAEICARVMESPSFFELDAPVWRVCGADVPMPYARTLE 136
L+T+E+ +PQ GIGAEIC V+E SF LDAPV R+ GADVPMPYA LE
Sbjct: 298 RLVTIEESFPQHGIGAEICMSVVEE-SFEYLDAPVERIAGADVPMPYAANLE 348
>08_02_1399 +
26771106-26771171,26772004-26772111,26772218-26772280,
26772382-26772468,26772931-26773056,26773418-26773551,
26773627-26773699,26773819-26773884,26774358-26774391,
26774904-26774953,26775067-26775191,26775278-26775392,
26775617-26775685
Length = 371
Score = 107 bits (256), Expect = 6e-24
Identities = 54/94 (57%), Positives = 69/94 (73%)
Frame = -2
Query: 417 DTALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKTHHLITVEQGWPQSGIGAEI 238
D +AAE L+ +GI EV+NLR+IRP+D TI S+ KT+ L+T+E+G+PQ G+GAEI
Sbjct: 252 DVKFQAAEILS-KEGISAEVINLRSIRPLDRATINASVRKTNRLVTLEEGFPQHGVGAEI 310
Query: 237 CARVMESPSFFELDAPVWRVCGADVPMPYARTLE 136
C V+E SF LDAPV R+ GADVPMPYA LE
Sbjct: 311 CMSVVED-SFEYLDAPVERIAGADVPMPYAANLE 343
>12_02_1121 + 26233881-26234000,26234138-26234175,26235840-26236812
Length = 376
Score = 79.4 bits (187), Expect = 1e-15
Identities = 42/110 (38%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Frame = -2
Query: 462 REGRHITXVCAGRGTDTALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKTHHLI 283
R G H+T + R ++AA+ L +KG + EV+++R+++P D TI SI KTH ++
Sbjct: 251 RPGEHVTILTYSRMRYHVMQAAKTLV-NKGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVL 309
Query: 282 TVEQGWPQSGIGAEICARVMESPSFFE-LDAPVWRVCGADVPMPYARTLE 136
VE+ GIGA + + +++ +F++ LDAP+ + DVP PYA TLE
Sbjct: 310 IVEECMRTGGIGASLRSAIID--NFWDYLDAPIMCLSSQDVPTPYAATLE 357
>03_05_0477 +
24707460-24707553,24707644-24707711,24707857-24707903,
24709188-24710160
Length = 393
Score = 77.0 bits (181), Expect = 7e-15
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Frame = -2
Query: 462 REGRHITXVCAGRGTDTALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKTHHLI 283
R G H+T + R ++AA+ L +KG + EV+++R+++P D TI SI KTH ++
Sbjct: 268 RPGEHVTILTYSRMRYHVMQAAKTLV-NKGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVL 326
Query: 282 TVEQGWPQSGIGAEICARVMESPSFFE-LDAPVWRVCGADVPMPYARTLE 136
VE+ GIGA + + +++ +F++ LDAP+ + DVP PYA LE
Sbjct: 327 IVEECMRTGGIGASLRSAIID--NFWDYLDAPIMCLSSQDVPTPYAAPLE 374
>07_01_0503 -
3751028-3751063,3751145-3751231,3751333-3751410,
3751488-3751583,3752124-3752210,3752289-3752357,
3752511-3752600,3752601-3752720,3752907-3753004,
3753084-3753193,3753463-3753533,3753679-3753714,
3753862-3753973,3754495-3754700
Length = 431
Score = 74.1 bits (174), Expect = 5e-14
Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = -2
Query: 471 KVEREGRHITXVCAGRGTDTA-LKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKT 295
+V R+G IT + G G A L+ A + A GI CE+++LRT+ P D +T+ S++KT
Sbjct: 304 EVIRKGSDITLI--GWGAQLAVLEEACEDAAKDGISCELIDLRTLIPWDKETVEASVSKT 361
Query: 294 HHLITVEQGWPQSGIGAEICARVMESPSFFELDAPVWRVCGADVPMP 154
L+ + G GAEI A + E F L+APV RVCG D P P
Sbjct: 362 GKLLVSHEAPITGGFGAEIAASITER-CFQRLEAPVARVCGLDTPFP 407
>06_01_0313 -
2250312-2250516,2250585-2250610,2250792-2251076,
2251289-2251567,2251817-2252121,2252581-2252860,
2253209-2253475
Length = 548
Score = 35.1 bits (77), Expect = 0.029
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = -2
Query: 459 EGRHITXVCAGRGTDTALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKTHHLIT 280
EG+ I + G L A L + GI+ V N R +P+D D I + LIT
Sbjct: 386 EGKEIAFLGYGDVVQRCL-IARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLIT 444
Query: 279 VEQGWPQSGIGAEI 238
VE+G G G+ +
Sbjct: 445 VEEG-TVGGFGSHV 457
>05_04_0284 -
19813179-19813340,19813464-19813748,19813850-19814131,
19814224-19814531,19814654-19814927,19815807-19816175,
19816372-19816434,19817495-19817789,19817818-19818008,
19818123-19818428,19818516-19818638
Length = 885
Score = 34.3 bits (75), Expect = 0.050
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -2
Query: 471 KVEREGRHITXVCAGRGTDTALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKTH 292
+V EG + + G L AA L G++ V + R +P+D T+ R +A +H
Sbjct: 742 RVLLEGERVALLGYGSAVQYCLAAAS-LVERHGLKVTVADARFCKPLD-QTLIRRLASSH 799
Query: 291 H-LITVEQGWPQSGIGAEI 238
L+TVE+G G G+ +
Sbjct: 800 EVLLTVEEG-SIGGFGSHV 817
>07_01_0646 +
4853546-4853623,4853732-4855357,4855467-4855751,
4856131-4856277
Length = 711
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = -2
Query: 456 GRHITXVCAGRGTDTALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKTHHLITV 277
G + + G +KAAE L GI V + R +P+D I A+ L+TV
Sbjct: 578 GNRVALLGYGTMVQACMKAAEALK-EHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTV 636
Query: 276 EQGWPQSGIGAEI 238
E+G G G+ +
Sbjct: 637 EEG-SIGGFGSHV 648
>10_08_0440 +
17930970-17931297,17931682-17931905,17932439-17932465,
17933747-17934340
Length = 390
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 408 LKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKTHHLITVEQGWPQSGIGAEICA 232
L ++G+ I E + + + F I RS+ T ++ ++ WP+ G A I A
Sbjct: 238 LTRISNISGTHLINKEYTSKLSTLELTFGYIVRSVEATINVRVIDGSWPEEGFSARITA 296
>07_03_1217 -
24943466-24943828,24944207-24944374,24944941-24945009,
24945091-24945197,24945846-24945980,24946090-24946195,
24946758-24946794,24949795-24949832
Length = 340
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 158 MGTSAPHTRHTGASSSKNDGDSMTRAQISAPIPDCGHP 271
M S+P+ RHT S +DG M + + G+P
Sbjct: 91 MNDSSPNERHTSTQSDNDDGHQMPDQDKTKSVSSLGNP 128
>11_01_0595 +
4732330-4732723,4732839-4732903,4733023-4733143,
4733596-4733687,4733850-4733915,4734106-4734125,
4734147-4734239,4734358-4734445,4734570-4734635,
4734728-4734843,4735410-4735500,4736133-4736234,
4736342-4736425,4736551-4736643,4736728-4736823,
4736914-4736999,4737528-4737606,4737675-4737788,
4737890-4737985,4738060-4738123,4738221-4738510,
4738901-4738956,4739060-4739177,4739287-4739367,
4739683-4739762,4740001-4740055,4740142-4740211,
4740279-4740468,4740567-4740690,4741055-4741129,
4741217-4741390
Length = 1112
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 432 AGRGTDTALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARS 307
AGRGTD L ++ + IE V+ T P D +T+ S
Sbjct: 609 AGRGTDIILGGNPKMLAKEIIEDNVLPFLTHEPPDVETVGES 650
>04_04_0318 +
24347364-24348826,24348920-24349048,24349158-24349293,
24349447-24349535,24349631-24349742,24349836-24349942,
24350033-24350129
Length = 710
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 173 PH-TRHTGASSSKNDGDSMTRAQISAP 250
PH R G SSS DG+S+ A S+P
Sbjct: 107 PHRARENGVSSSSRDGESVVAASASSP 133
>07_03_1197 +
24719746-24720081,24721726-24721976,24722065-24722233,
24722339-24722683
Length = 366
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -2
Query: 369 ECEVVNLRTIRPMDFDTIARSIAKTHHLITVEQGWPQSGI 250
E ++V + TIR +DF + R + +HLI V+ G P+ I
Sbjct: 19 ELDIV-IPTIRNLDFLEMWRPFFQPYHLIIVQDGDPKKTI 57
>04_04_0503 -
25701050-25701343,25701431-25701528,25701629-25701689,
25701772-25701842,25701922-25702048,25702160-25702244,
25702346-25702409,25702732-25702793,25703214-25703284,
25703700-25703795,25703960-25704108,25704196-25704265,
25704483-25704523,25704668-25704743
Length = 454
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 TRHTGASSSKNDGDSMTRAQISAPIPDCGHPCST 280
T T +S +G + RA +S+ P+CG P T
Sbjct: 361 TDKTRPTSLSRNGSTSRRAVVSSSKPNCGDPSDT 394
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,881,568
Number of Sequences: 37544
Number of extensions: 186340
Number of successful extensions: 528
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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