Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_M20
         (472 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038606-5|AAB92024.2|  352|Caenorhabditis elegans Hypothetical ...   138   2e-33
Z79695-1|CAB01970.1|  366|Caenorhabditis elegans Hypothetical pr...    72   2e-13
Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...    43   1e-04
Z81061-1|CAB02934.3|  436|Caenorhabditis elegans Hypothetical pr...    27   6.8  
AL021471-1|CAA16295.1|  241|Caenorhabditis elegans Hypothetical ...    27   9.0  

>AF038606-5|AAB92024.2|  352|Caenorhabditis elegans Hypothetical
           protein C04C3.3 protein.
          Length = 352

 Score =  138 bits (333), Expect = 2e-33
 Identities = 63/112 (56%), Positives = 85/112 (75%)
 Frame = -2

Query: 471 KVEREGRHITXVCAGRGTDTALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKTH 292
           K+ER G H+T V   RG + +L+AA+QL    G+  EV+NLR++RP DF++I +S+ KTH
Sbjct: 221 KIERAGDHVTIVSYSRGVEFSLEAAKQLEAI-GVSAEVINLRSLRPFDFESIRQSVHKTH 279

Query: 291 HLITVEQGWPQSGIGAEICARVMESPSFFELDAPVWRVCGADVPMPYARTLE 136
           HL++VE GWP +GIG+EI A+VMES  F +LDAP+ RV G DVPMPY +TLE
Sbjct: 280 HLVSVETGWPFAGIGSEIAAQVMESDVFDQLDAPLLRVTGVDVPMPYTQTLE 331


>Z79695-1|CAB01970.1|  366|Caenorhabditis elegans Hypothetical
           protein F27D4.5 protein.
          Length = 366

 Score = 71.7 bits (168), Expect = 2e-13
 Identities = 38/104 (36%), Positives = 56/104 (53%)
 Frame = -2

Query: 462 REGRHITXVCAGRGTDTALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAKTHHLI 283
           R G+ +T V  G     AL+AA+        + EV++L+TI+P D D +  S+ KT  LI
Sbjct: 241 RSGKDLTLVAWGTQVHVALEAAQLAKEKLNADVEVIDLQTIQPWDEDHVVESVQKTGRLI 300

Query: 282 TVEQGWPQSGIGAEICARVMESPSFFELDAPVWRVCGADVPMPY 151
              +    SG GAEI A  ++   F  L++P+ RV G D P P+
Sbjct: 301 VTHEAPISSGFGAEI-ASTVQKRCFLNLESPIDRVAGFDTPFPH 343


>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = -2

Query: 471 KVEREGRHITXVCAGRGTDT--ALKAAEQLAGSKGIECEVVNLRTIRPMDFDTIARSIAK 298
           KV ++      V  G G     +LKAAE+L   +GI   V++  TI+P+D  TIA    K
Sbjct: 491 KVVKQSAQDKIVLVGSGVTLYESLKAAEELE-KEGIHATVIDPFTIKPLDGKTIAEHALK 549

Query: 297 T-HHLITVEQGWPQSGIGAEICARVMESPS 211
               ++T E  +   GIG  + A + + P+
Sbjct: 550 VGGRVVTTEDHYAAGGIGEAVSAALADYPT 579


>Z81061-1|CAB02934.3|  436|Caenorhabditis elegans Hypothetical
           protein F14H8.1 protein.
          Length = 436

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +1

Query: 355 YYFTFYTLASSQLFSGLERGVGASSSAHXRDMPTL 459
           ++FT +TL+ ++++ G+   V  + S   +DM  L
Sbjct: 323 FHFTNFTLSLNEMYPGMSDTVAPTDSRRRKDMKAL 357


>AL021471-1|CAA16295.1|  241|Caenorhabditis elegans Hypothetical
           protein Y17D7C.1 protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 312 RSIAKTHHLITVEQGWPQSGIGAEICARVMESPS 211
           +S  +T   I + Q W + G+  +ICA ++E+ S
Sbjct: 55  KSYVRTQPKIIINQKWHRLGVCLDICAGLVETLS 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,695,356
Number of Sequences: 27780
Number of extensions: 140784
Number of successful extensions: 316
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)