Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_M02
         (765 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56AF4 Cluster: PREDICTED: similar to CG5484-PB,...    58   2e-07
UniRef50_Q5BSJ3 Cluster: SJCHGC04045 protein; n=1; Schistosoma j...    42   0.022
UniRef50_Q2PJ77 Cluster: Putative uncharacterized protein; n=3; ...    38   0.27 
UniRef50_A7RZV4 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ...    37   0.63 
UniRef50_Q5BJH7 Cluster: Yip1-interacting factor homolog B; n=16...    35   1.9  

>UniRef50_UPI0000D56AF4 Cluster: PREDICTED: similar to CG5484-PB,
           isoform B; n=2; Endopterygota|Rep: PREDICTED: similar to
           CG5484-PB, isoform B - Tribolium castaneum
          Length = 360

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = -3

Query: 691 ANPYSDAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHLVAS 560
           A P S   D   P G KRR+YFLLFVA  QP+L WWL++HL+ S
Sbjct: 308 AQPTSYYGDVAPPTGNKRRLYFLLFVAAVQPVLSWWLSFHLIGS 351


>UniRef50_Q5BSJ3 Cluster: SJCHGC04045 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04045 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 137

 Score = 41.5 bits (93), Expect = 0.022
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -3

Query: 643 KRRVYFLLFVAITQPLLCWWLTYHLV 566
           KRR+Y LL +A+ QPL+ WWLT  +V
Sbjct: 111 KRRIYLLLLIALVQPLMMWWLTRRVV 136


>UniRef50_Q2PJ77 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 380

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 649 GTKRRVYFLLFVAITQPLLCWWLT 578
           G KR++  + FV ITQPL+ WWLT
Sbjct: 302 GRKRKLILVAFVVITQPLIMWWLT 325


>UniRef50_A7RZV4 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 248

 Score = 36.7 bits (81), Expect = 0.63
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -3

Query: 646 TKRRVYFLLFVAITQPLLCWWLTYHL 569
           +KRR+Y LLF+A+ QP   ++LT HL
Sbjct: 223 SKRRIYLLLFIAVLQPFFMFFLTSHL 248


>UniRef50_Q5BJH7 Cluster: Yip1-interacting factor homolog B; n=16;
           Theria|Rep: Yip1-interacting factor homolog B - Homo
           sapiens (Human)
          Length = 314

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -3

Query: 637 RVYFLLFVAITQPLLCWWLTYHLV 566
           R+Y  + VA  QP+L +WLT+HLV
Sbjct: 290 RMYLTMAVAAAQPMLMYWLTFHLV 313


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,575,259
Number of Sequences: 1657284
Number of extensions: 10836192
Number of successful extensions: 24948
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24923
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)