Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_M02
(765 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC091477-1|AAH91477.2| 314|Homo sapiens Yip1 interacting factor... 35 0.28
BC007644-1|AAH07644.1| 310|Homo sapiens YIF1B protein protein. 35 0.28
AY358965-1|AAQ89324.1| 283|Homo sapiens ADPH3073 protein. 35 0.28
AF258578-1|AAG23781.1| 283|Homo sapiens PP4519 protein. 35 0.28
CR456710-1|CAG32991.1| 293|Homo sapiens YIF1 protein. 33 1.5
BC009892-1|AAH09892.2| 162|Homo sapiens YIF1A protein protein. 33 1.5
BC001299-1|AAH01299.1| 293|Homo sapiens Yip1 interacting factor... 33 1.5
AF004876-1|AAD01206.1| 293|Homo sapiens 54TMp protein. 33 1.5
BX284686-21|CAM26229.1| 160|Homo sapiens G-protein signalling m... 32 2.0
BC018724-1|AAH18724.1| 160|Homo sapiens GPSM3 protein protein. 32 2.0
AL845464-21|CAI41816.1| 160|Homo sapiens G-protein signalling m... 32 2.0
AL662884-26|CAI18360.1| 160|Homo sapiens G-protein signalling m... 32 2.0
AL662830-8|CAI17541.1| 160|Homo sapiens G-protein signalling mo... 32 2.0
AJ243937-2|CAB51288.1| 160|Homo sapiens G18.1b protein protein. 32 2.0
AF155657-1|AAF67476.1| 160|Homo sapiens putative 17.9 kDa prote... 32 2.0
AL596222-1|CAH70182.1| 2471|Homo sapiens Notch homolog 2 (Drosop... 31 6.0
AL512503-1|CAH72483.1| 2471|Homo sapiens Notch homolog 2 (Drosop... 31 6.0
AL359752-4|CAI18974.1| 2471|Homo sapiens Notch homolog 2 (Drosop... 31 6.0
AK027869-1|BAB55419.1| 773|Homo sapiens protein ( Homo sapiens ... 31 6.0
AF315356-1|AAG37073.1| 2471|Homo sapiens NOTCH2 protein protein. 31 6.0
AF308601-1|AAA36377.2| 2471|Homo sapiens NOTCH 2 protein. 31 6.0
>BC091477-1|AAH91477.2| 314|Homo sapiens Yip1 interacting factor
homolog B (S. cerevisiae) protein.
Length = 314
Score = 35.1 bits (77), Expect = 0.28
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 637 RVYFLLFVAITQPLLCWWLTYHLV 566
R+Y + VA QP+L +WLT+HLV
Sbjct: 290 RMYLTMAVAAAQPMLMYWLTFHLV 313
>BC007644-1|AAH07644.1| 310|Homo sapiens YIF1B protein protein.
Length = 310
Score = 35.1 bits (77), Expect = 0.28
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 637 RVYFLLFVAITQPLLCWWLTYHLV 566
R+Y + VA QP+L +WLT+HLV
Sbjct: 286 RMYLTMAVAAAQPMLMYWLTFHLV 309
>AY358965-1|AAQ89324.1| 283|Homo sapiens ADPH3073 protein.
Length = 283
Score = 35.1 bits (77), Expect = 0.28
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 637 RVYFLLFVAITQPLLCWWLTYHLV 566
R+Y + VA QP+L +WLT+HLV
Sbjct: 259 RMYLTMAVAAAQPMLMYWLTFHLV 282
>AF258578-1|AAG23781.1| 283|Homo sapiens PP4519 protein.
Length = 283
Score = 35.1 bits (77), Expect = 0.28
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 637 RVYFLLFVAITQPLLCWWLTYHLV 566
R+Y + VA QP+L +WLT+HLV
Sbjct: 259 RMYLTMAVAAAQPMLMYWLTFHLV 282
>CR456710-1|CAG32991.1| 293|Homo sapiens YIF1 protein.
Length = 293
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 676 DAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHLV 566
D+ P P + ++Y L A QPL+ +WLT+HLV
Sbjct: 257 DSMGGPVPR-QRLQLYLTLGAAAFQPLIIYWLTFHLV 292
>BC009892-1|AAH09892.2| 162|Homo sapiens YIF1A protein protein.
Length = 162
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 676 DAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHLV 566
D+ P P + ++Y L A QPL+ +WLT+HLV
Sbjct: 126 DSMGGPVPR-QRLQLYLTLGAAAFQPLIIYWLTFHLV 161
>BC001299-1|AAH01299.1| 293|Homo sapiens Yip1 interacting factor
homolog A (S. cerevisiae) protein.
Length = 293
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 676 DAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHLV 566
D+ P P + ++Y L A QPL+ +WLT+HLV
Sbjct: 257 DSMGGPVPR-QRLQLYLTLGAAAFQPLIIYWLTFHLV 292
>AF004876-1|AAD01206.1| 293|Homo sapiens 54TMp protein.
Length = 293
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 676 DAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHLV 566
D+ P P + ++Y L A QPL+ +WLT+HLV
Sbjct: 257 DSMGGPVPR-QRLQLYLTLGAAAFQPLIIYWLTFHLV 292
>BX284686-21|CAM26229.1| 160|Homo sapiens G-protein signalling
modulator 3 (AGS3-like, C. elegans) protein.
Length = 160
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 745 GSQGPEQPXYGFPNPPYAANPYSDAWDKPTPGGTK 641
G QGP Q G+P P P+ A P P GT+
Sbjct: 12 GEQGPPQDEEGWPPPNSTTRPWRSAPPSPPPPGTR 46
>BC018724-1|AAH18724.1| 160|Homo sapiens GPSM3 protein protein.
Length = 160
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 745 GSQGPEQPXYGFPNPPYAANPYSDAWDKPTPGGTK 641
G QGP Q G+P P P+ A P P GT+
Sbjct: 12 GEQGPPQDEEGWPPPNSTTRPWRSAPPSPPPPGTR 46
>AL845464-21|CAI41816.1| 160|Homo sapiens G-protein signalling
modulator 3 (AGS3-like, C. elegans) protein.
Length = 160
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 745 GSQGPEQPXYGFPNPPYAANPYSDAWDKPTPGGTK 641
G QGP Q G+P P P+ A P P GT+
Sbjct: 12 GEQGPPQDEEGWPPPNSTTRPWRSAPPSPPPPGTR 46
>AL662884-26|CAI18360.1| 160|Homo sapiens G-protein signalling
modulator 3 (AGS3-like, C. elegans) protein.
Length = 160
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 745 GSQGPEQPXYGFPNPPYAANPYSDAWDKPTPGGTK 641
G QGP Q G+P P P+ A P P GT+
Sbjct: 12 GEQGPPQDEEGWPPPNSTTRPWRSAPPSPPPPGTR 46
>AL662830-8|CAI17541.1| 160|Homo sapiens G-protein signalling
modulator 3 (AGS3-like, C. elegans) protein.
Length = 160
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 745 GSQGPEQPXYGFPNPPYAANPYSDAWDKPTPGGTK 641
G QGP Q G+P P P+ A P P GT+
Sbjct: 12 GEQGPPQDEEGWPPPNSTTRPWRSAPPSPPPPGTR 46
>AJ243937-2|CAB51288.1| 160|Homo sapiens G18.1b protein protein.
Length = 160
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 745 GSQGPEQPXYGFPNPPYAANPYSDAWDKPTPGGTK 641
G QGP Q G+P P P+ A P P GT+
Sbjct: 12 GEQGPPQDEEGWPPPNSTTRPWRSAPPSPPPPGTR 46
>AF155657-1|AAF67476.1| 160|Homo sapiens putative 17.9 kDa protein
protein.
Length = 160
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 745 GSQGPEQPXYGFPNPPYAANPYSDAWDKPTPGGTK 641
G QGP Q G+P P P+ A P P GT+
Sbjct: 12 GEQGPPQDEEGWPPPNSTTRPWRSAPPSPPPPGTR 46
>AL596222-1|CAH70182.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
protein.
Length = 2471
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 733 PEQPXYGFPNPPYAANPYSDAWDKPTPGG 647
PE P + P++A+ +SD PTPGG
Sbjct: 2419 PESPDQWSSSSPHSASDWSDVTTSPTPGG 2447
>AL512503-1|CAH72483.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
protein.
Length = 2471
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 733 PEQPXYGFPNPPYAANPYSDAWDKPTPGG 647
PE P + P++A+ +SD PTPGG
Sbjct: 2419 PESPDQWSSSSPHSASDWSDVTTSPTPGG 2447
>AL359752-4|CAI18974.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
protein.
Length = 2471
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 733 PEQPXYGFPNPPYAANPYSDAWDKPTPGG 647
PE P + P++A+ +SD PTPGG
Sbjct: 2419 PESPDQWSSSSPHSASDWSDVTTSPTPGG 2447
>AK027869-1|BAB55419.1| 773|Homo sapiens protein ( Homo sapiens
cDNA FLJ14963 fis, clone PLACE4000522, weakly similar to
NEUROGENIC LOCUS NOTCH PROTEIN. ).
Length = 773
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 733 PEQPXYGFPNPPYAANPYSDAWDKPTPGG 647
PE P + P++A+ +SD PTPGG
Sbjct: 721 PESPDQWSSSSPHSASDWSDVTTSPTPGG 749
>AF315356-1|AAG37073.1| 2471|Homo sapiens NOTCH2 protein protein.
Length = 2471
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 733 PEQPXYGFPNPPYAANPYSDAWDKPTPGG 647
PE P + P++A+ +SD PTPGG
Sbjct: 2419 PESPDQWSSSSPHSASDWSDVTTSPTPGG 2447
>AF308601-1|AAA36377.2| 2471|Homo sapiens NOTCH 2 protein.
Length = 2471
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 733 PEQPXYGFPNPPYAANPYSDAWDKPTPGG 647
PE P + P++A+ +SD PTPGG
Sbjct: 2419 PESPDQWSSSSPHSASDWSDVTTSPTPGG 2447
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,874,432
Number of Sequences: 237096
Number of extensions: 1621365
Number of successful extensions: 3069
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3062
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -