BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_M02
(765 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011135-1|AAR82802.1| 405|Drosophila melanogaster GM14490p pro... 32 0.99
BT001788-1|AAN71543.1| 245|Drosophila melanogaster RH23428p pro... 32 0.99
AY118289-1|AAM48318.1| 393|Drosophila melanogaster AT18469p pro... 32 0.99
AE014297-3989|AAN14084.1| 393|Drosophila melanogaster CG5484-PB... 32 0.99
AE014297-3988|AAF56617.1| 397|Drosophila melanogaster CG5484-PA... 32 0.99
AE014297-3987|AAN14083.1| 402|Drosophila melanogaster CG5484-PC... 32 0.99
>BT011135-1|AAR82802.1| 405|Drosophila melanogaster GM14490p
protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 688 NPYSDAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHL 569
+PY + GG KR++YFL + Q L + L+ HL
Sbjct: 352 DPYGNPQQFDYSGGKKRKLYFLFMIVAGQALFAFLLSKHL 391
>BT001788-1|AAN71543.1| 245|Drosophila melanogaster RH23428p
protein.
Length = 245
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 688 NPYSDAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHL 569
+PY + GG KR++YFL + Q L + L+ HL
Sbjct: 192 DPYGNPQQFDYSGGKKRKLYFLFMIVAGQALFAFLLSKHL 231
>AY118289-1|AAM48318.1| 393|Drosophila melanogaster AT18469p
protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 688 NPYSDAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHL 569
+PY + GG KR++YFL + Q L + L+ HL
Sbjct: 340 DPYGNPQQFDYSGGKKRKLYFLFMIVAGQALFAFLLSKHL 379
>AE014297-3989|AAN14084.1| 393|Drosophila melanogaster CG5484-PB,
isoform B protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 688 NPYSDAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHL 569
+PY + GG KR++YFL + Q L + L+ HL
Sbjct: 340 DPYGNPQQFDYSGGKKRKLYFLFMIVAGQALFAFLLSKHL 379
>AE014297-3988|AAF56617.1| 397|Drosophila melanogaster CG5484-PA,
isoform A protein.
Length = 397
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 688 NPYSDAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHL 569
+PY + GG KR++YFL + Q L + L+ HL
Sbjct: 344 DPYGNPQQFDYSGGKKRKLYFLFMIVAGQALFAFLLSKHL 383
>AE014297-3987|AAN14083.1| 402|Drosophila melanogaster CG5484-PC,
isoform C protein.
Length = 402
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 688 NPYSDAWDKPTPGGTKRRVYFLLFVAITQPLLCWWLTYHL 569
+PY + GG KR++YFL + Q L + L+ HL
Sbjct: 349 DPYGNPQQFDYSGGKKRKLYFLFMIVAGQALFAFLLSKHL 388
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,793,142
Number of Sequences: 53049
Number of extensions: 491618
Number of successful extensions: 1128
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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