Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_M01
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 111 4e-25
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 94 1e-19
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 91 1e-18
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 47 2e-05
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical... 36 0.026
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 33 0.18
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 33 0.31
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 33 0.31
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 31 1.3
Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear recep... 30 2.2
Z68161-3|CAD89736.1| 308|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC024860-3|AAK29985.1| 345|Caenorhabditis elegans Hypothetical ... 29 5.1
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z48585-10|CAJ43439.1| 338|Caenorhabditis elegans Hypothetical p... 28 8.9
U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.9
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 111 bits (268), Expect = 4e-25
Identities = 78/213 (36%), Positives = 109/213 (51%), Gaps = 8/213 (3%)
Frame = -3
Query: 798 GGXIIDDKHVISAAHCVA---HMTSWDVARLTARLGXYNIRTNTETSHIERKIKRVVRHR 628
GG +ID V++AAHC A TS+ V R+G + R+ + + H ++ V H
Sbjct: 85 GGSLIDPNFVLTAAHCFAKDRRPTSYSV-----RVGGH--RSGSGSPH---RVTAVSIHP 134
Query: 627 GFDIRTLYN-DIAILTLDQPVTFTKNIRPICLPSGGRAYAGLVATVIGWGSLRE-SGPQP 454
++I + D AI+ + PV + RPICLPS A + V GWGS E S
Sbjct: 135 WYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLP-AVENRLCVVTGWGSTIEGSSLSA 193
Query: 453 SVLQEVSIPIWTNSECRLKYGPAAPGGI-VDHMICAGKA--SMDSCSGDSGGPLMVNEGG 283
L+E+ +P+ + C P G I + M+CAG + +DSC GDSGGPLM G
Sbjct: 194 PTLREIHVPLLSTLFCSSL--PNYIGRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCARDG 251
Query: 282 TWNQVGIVSWGIGCGKGQYPGVYTRITAFLPWI 184
W G+VSWGIGC + PGVY + + WI
Sbjct: 252 HWELTGVVSWGIGCARPGMPGVYGNVHSASTWI 284
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 93.9 bits (223), Expect = 1e-19
Identities = 69/212 (32%), Positives = 103/212 (48%), Gaps = 7/212 (3%)
Frame = -3
Query: 798 GGXIIDDKHVISAAHCVAHMTSWDVARLTARLGXYNIRTNTETSHIERKIKRVVRHRGFD 619
G I+D H+I+AAHC V+ +G ++ N +T E+ I + R +
Sbjct: 55 GASILDKTHLITAAHCFEEDER--VSSYEVVVGDWD---NNQTDGNEQ-IFYLQRIHFYP 108
Query: 618 I-RTLYN-DIAILTLDQP-VTFTKNIRPICLPSGGRAYA-GLVATVIGWGSLRESGPQPS 451
+ + +++ DIAIL + P + F + +PICLPS Y G V GWGS+ +
Sbjct: 109 LYKDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSMGLRYAER- 167
Query: 450 VLQEVSIPIWTNSECRLKYGPAAPGGIVDHMICAG--KASMDSCSGDSGGPLMVN-EGGT 280
LQ IPI +C + CAG + +DSC GDSGGP E G
Sbjct: 168 -LQAALIPIINRFDC--VNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGA 224
Query: 279 WNQVGIVSWGIGCGKGQYPGVYTRITAFLPWI 184
+ G++SWG GC + + PG+YT + +L WI
Sbjct: 225 FVLAGVISWGDGCAQKKQPGIYTMVAPYLSWI 256
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 90.6 bits (215), Expect = 1e-18
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 17/223 (7%)
Frame = -3
Query: 798 GGXIIDDKHVISAAHCVAHMTSWDVARLTARLGXYNIRTNTETSHIERKIKRVVRHRGFD 619
G +IDD +++AAHC + + + + N E S +K H G++
Sbjct: 67 GATVIDDFWLVTAAHCALQLQTRSFVYVREP------KNNRERSF---SVKEAYIHSGYN 117
Query: 618 IRTLYNDIAILTLDQPVTFTKNIRPICLPSGGRAYAGLV--ATVIGWGSL--RESGPQPS 451
+T NDIA+L + ++ I+P+CL VIG+G +S +P
Sbjct: 118 NQTADNDIALLRISSDLS-KLGIKPVCLVHDDSKLLKQYKNGVVIGYGLTLGEDSSGEPK 176
Query: 450 V-----LQEVSIPIWTNSEC--RLKYGPAAPGGIVDHMICAGKASMDSCSGDSGGPLMVN 292
+ LQ S+PI ++ +C ++ I + ICAG + GDSGGPL+++
Sbjct: 177 LINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHGTAPGDSGGPLLIH 236
Query: 291 EG-GTWNQVGIVSWGIG-----CGKGQYPGVYTRITAFLPWIQ 181
+ G + Q+GI S+G +G++PGVYTRI+ ++PWIQ
Sbjct: 237 KSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQ 279
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 57.6 bits (133), Expect = 1e-08
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Frame = -3
Query: 603 NDIAILTLDQPVTFTKNIRPICLPSGGRAYAGLVATVIGWGSL-RESGPQPSVLQEVSIP 427
+D AI+ +++ + F++N+RPICLP Y +A V GWG + ESGP ++ E IP
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLPRPNMYYTKSLA-VPGWGRIFNESGP---LIHE--IP 196
Query: 426 IWTNSECRLKYGPAAPGGIVDHMICAGKASMD------SCSGDSGGPLMVNEG--GTWNQ 271
+ + +C+ + P D ICA ++ +C GDSGG L + G
Sbjct: 197 MRIDRDCKRPWSDRLPAD-ADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAFL 255
Query: 270 VGIVSWGI-GCGKGQYPGVYTRITAFL 193
+ I S+G GC +TR+ +L
Sbjct: 256 IAITSFGTRGCPSNML-ARFTRVDMYL 281
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 46.8 bits (106), Expect = 2e-05
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Frame = -3
Query: 603 NDIAILTLDQPVTFTKNIRPICLP--SGGRAYAGLVATVIGWGSLRESGPQPS---VLQE 439
NDI IL L+ + + CLP +G T GWGS G + ++Q
Sbjct: 176 NDIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGSDPGKGFDNAAFPMIQV 235
Query: 438 VSIPIWTNSECRLKYGPAAPGGIVDHMICAGKASMDSCSGDSGGPLMVNEGGTWNQ--VG 265
+++ T + C +G + P D A + + CSGDSGG L ++ + + +
Sbjct: 236 LTLATETLATCEENWGTSIP---FDSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIA 292
Query: 264 IVSWGIGC 241
IVS+G C
Sbjct: 293 IVSYGSDC 300
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 40.7 bits (91), Expect = 0.001
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Frame = -3
Query: 615 RTLYNDIAILTLDQPVTFTKNIRPICLPSGGRAYAGLVATVIGWGSLRESGPQPSVLQEV 436
R +NDIA+ L++P+ F+K+I P CLPS + +G R+ P SVL+
Sbjct: 117 RESFNDIAVFELEEPIEFSKDIFPACLPSAPKIPRIRETGYKLFGYGRD--PSDSVLESG 174
Query: 435 SIPIWTN--SECRLKYGPAAPGGIVDHMICAGKASMD-SCSGDSGGPLMVNEGGTWN--- 274
+ + +EC + GG+ C + SC GDSG +V T N
Sbjct: 175 KLKSLYSFVAECSDDF---PYGGV----YCTSAVNRGLSCDGDSGSG-VVRTSDTRNVQV 226
Query: 273 QVGIVSWGIGC 241
VG++S G+ C
Sbjct: 227 LVGVLSAGMPC 237
>AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical
protein F25E5.10 protein.
Length = 401
Score = 36.3 bits (80), Expect = 0.026
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 1/156 (0%)
Frame = -3
Query: 675 ETSHIERKIKRVVRHRGFDIRTLYNDIAILTLDQPVTFTKNIRPICLPSGGRAYAGLVAT 496
++ H + +K V G +N +A++ L +PV +N RPIC S R Y G
Sbjct: 147 QSGHEQLDVKSVRILNGCVKSFQFNRVAVIELKKPVHKGQNARPICFGSDFRIYTGY--K 204
Query: 495 VIGWGSLRESGPQPSVLQEVSIPIWTNSECRLKYGPAAPGGIVDHMICAGKASMDSCSGD 316
G+G R + + L+ I E K+ P+ + + C A C+GD
Sbjct: 205 FFGYGDNR-GAVKDATLRHTKI-----KEVPCKH-PS------EDLFCV-TAENPLCNGD 250
Query: 315 SGGPLMVNEGGTWNQVGI-VSWGIGCGKGQYPGVYT 211
GG + G+ G+ V C K VYT
Sbjct: 251 FGGAAVSKFHGSVRAYGVYVDGPYECNKANRRTVYT 286
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 280 RTTFVDHQWPATITTAGIHTSFSSA-----NHVIDYTA-RSSGAVFKSTFRVS-PNR 429
R ++ +WP T+ + IH SSA +H ID RSS A F S R S P+R
Sbjct: 43 REPMIEQRWPTTVRNSSIHPHVSSAHPSYRSHSIDAAVNRSSSACFHSPHRPSFPSR 99
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = +1
Query: 277 PRTTFVDHQWPATITTAGIHTSFSSA-----NHVIDYTA-RSSGAVFKSTFRVS-PNR 429
P ++ +WP T+ + IH SSA +H ID RSS A F S R S P+R
Sbjct: 10 PDYPMIEQRWPTTVRNSSIHPHVSSAHPSYRSHSIDAAVNRSSSACFHSPHRPSFPSR 67
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 197 NAVMRVYTPGYCPLPQPIPHDTIPTWFHVPPSLTISG 307
+A+ RV+TP Y P I H +PT + + TI G
Sbjct: 158 DAIARVHTPNYVPTENDILHTRVPTMGVIEVNFTIKG 194
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 197 NAVMRVYTPGYCPLPQPIPHDTIPTWFHVPPSLTISG 307
+A+ RV+TP Y P I H +PT + + TI G
Sbjct: 158 DAIARVHTPNYVPTENDILHTRVPTMGVIEVNFTIKG 194
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 203 VMRVYTPGYCPLPQPIPHDTIPTWFHVPPSLTISG 307
+ RV+TP Y P I H +PT + + TI G
Sbjct: 160 IARVHTPNYVPTENDILHTRVPTMGVIEVNFTIKG 194
>Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical
protein F54D1.4 protein.
Length = 536
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 239 PQPIPHDTIPTWFHVPPSLT---ISGPPLSPLQESILAFPAQIM*STIPPGAAGPYLS 403
P P P DT+P + PPSL+ IS PP P Q+ + +Q+ ++ P + P+ S
Sbjct: 408 PVPPPSDTVPLFHFSPPSLSPCQISAPP--PPQQQYTDY-SQMPSTSSYPANSSPFQS 462
>AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear receptor
NHR-7 protein.
Length = 536
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 239 PQPIPHDTIPTWFHVPPSLT---ISGPPLSPLQESILAFPAQIM*STIPPGAAGPYLS 403
P P P DT+P + PPSL+ IS PP P Q+ + +Q+ ++ P + P+ S
Sbjct: 408 PVPPPSDTVPLFHFSPPSLSPCQISAPP--PPQQQYTDY-SQMPSTSSYPANSSPFQS 462
>Z68161-3|CAD89736.1| 308|Caenorhabditis elegans Hypothetical
protein F20C5.7 protein.
Length = 308
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 646 FNFSFDVRCFGVGSNVVXTQSGSKTSYVPXSHMSY 750
FN D+RC+ + TQ SKT V HM Y
Sbjct: 168 FNCKLDLRCYLIQIWTQLTQIHSKTKKVDEDHMKY 202
>AC024860-3|AAK29985.1| 345|Caenorhabditis elegans Hypothetical
protein Y71H2AR.2 protein.
Length = 345
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 96 NKMF*CFS*RHPIFYRYNVLYIFLTW 173
N+ F CFS HPIF++ LY TW
Sbjct: 321 NQSFKCFSGEHPIFFK---LYHLCTW 343
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 242 QPIPHDTI-PTWFHVPPSLTISGPPLSPLQESILAFPAQI 358
Q PH+ P H+ P +I PP P+Q I A PAQ+
Sbjct: 855 QSTPHNLCCPKTSHLVPE-SIPAPPFEPVQMPIPAPPAQV 893
>Z48585-10|CAJ43439.1| 338|Caenorhabditis elegans Hypothetical
protein ZK673.11b protein.
Length = 338
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 236 LPQPIPHDTIPTWFHVPPSLTISGPPLSPLQESI 337
LPQP P +P + PPSL P P + I
Sbjct: 176 LPQPTPEFQLPAPTYSPPSLPSESPASKPTKIDI 209
>U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical
protein F40H6.2 protein.
Length = 997
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 251 VSVAVKDSTQVCTHASLHSYLGYRRTPSE 165
V + KDS Q ++ ++SY+GY T SE
Sbjct: 214 VYIGFKDSIQDASNTYIYSYIGYAFTSSE 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,081,586
Number of Sequences: 27780
Number of extensions: 490362
Number of successful extensions: 1509
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -