Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_L24
         (821 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.73 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.73 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.9  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 112 LLNCQNYIPNNVEEESE 162
           LL C N+I NN++ E+E
Sbjct: 254 LLTCLNFITNNLKSENE 270


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 112 LLNCQNYIPNNVEEESE 162
           LL C N+I NN++ E+E
Sbjct: 254 LLTCLNFITNNLKSENE 270


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +3

Query: 504 SEGEAPRGLRA--PPLYYYSFFKLNLYTIL 587
           S  E  R  R   PP   Y  F L LYT+L
Sbjct: 104 SPDECARACREGEPPRICYYHFTLELYTVL 133


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +3

Query: 504 SEGEAPRGLRA--PPLYYYSFFKLNLYTIL 587
           S  E  R  R   PP   Y  F L LYT+L
Sbjct: 104 SPDECARACREGEPPRICYYHFTLELYTVL 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,647
Number of Sequences: 336
Number of extensions: 2821
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)