Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_L24
         (821 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical p...    41   0.001
Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical pr...    35   0.061
AF100672-1|AAC68997.2|  334|Caenorhabditis elegans Hypothetical ...    30   1.7  

>Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical
           protein T05G5.10 protein.
          Length = 195

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = -2

Query: 817 DLREDLXIPDGDLGTQLRTDFDSGK-ELLCTVLKSCGEECVIAVKANT 677
           +L++DL +P+GDLG  +R   +  +  +L  V+ +CGEE ++  K +T
Sbjct: 146 ELKDDLKMPEGDLGNTIREALEKDEGSVLVQVVAACGEEAILGYKIST 193


>Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical
           protein F54C9.1 protein.
          Length = 161

 Score = 35.1 bits (77), Expect = 0.061
 Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = -2

Query: 811 REDLXIPDGDLGTQLRTDFDSGK-ELLCTVLKSCGEECVIAVKANT 677
           ++DL +PD +LG Q+R  ++  +  +L  V+ + GEE ++  K +T
Sbjct: 114 KDDLKLPDTELGQQIRDAYEKDEGSVLVQVVSAIGEEAILGWKVST 159


>AF100672-1|AAC68997.2|  334|Caenorhabditis elegans Hypothetical
           protein W05E7.2 protein.
          Length = 334

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 139 NNVEEESEIVFELSIYNYK*KKNRYIIFYCFLLKLYF 249
           N   +E+  +F ++ + YK  K  YIIF C LL + F
Sbjct: 50  NRKRDEAAFIFPITNHFYKMVKTSYIIFTCGLLLVLF 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,878,635
Number of Sequences: 27780
Number of extensions: 264212
Number of successful extensions: 664
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)