Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_L23
         (542 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0855 - 32271631-32271712,32271823-32271922,32272012-322720...    59   3e-09
01_03_0268 + 14436631-14436756,14436866-14436929,14437001-144371...    57   8e-09
06_01_0762 + 5699619-5699744,5699831-5699891,5699979-5700078,570...    41   6e-04
05_02_0026 + 5716467-5716655,5716833-5718797                           29   3.2  

>02_05_0855 -
           32271631-32271712,32271823-32271922,32272012-32272072,
           32272169-32272294
          Length = 122

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = -2

Query: 508 GKPDVTFTISDEDVADLISGKLNPQKAFXQGKIKIQGNMGLAMKLT 371
           GKPD TF+ +D+D   + SGKLNPQ AF  GK+KI+G++  A K T
Sbjct: 67  GKPDATFSFTDDDFLAISSGKLNPQMAFIMGKLKIKGSISAAQKFT 112


>01_03_0268 +
           14436631-14436756,14436866-14436929,14437001-14437100,
           14437187-14437478
          Length = 193

 Score = 57.2 bits (132), Expect = 8e-09
 Identities = 24/46 (52%), Positives = 32/46 (69%)
 Frame = -2

Query: 508 GKPDVTFTISDEDVADLISGKLNPQKAFXQGKIKIQGNMGLAMKLT 371
           GKPD TF+ +D+D   + SGKLNPQ  F  GK+KI+G++  A K T
Sbjct: 68  GKPDATFSFTDDDFLAISSGKLNPQMVFIMGKLKIKGSISAAQKFT 113


>06_01_0762 +
           5699619-5699744,5699831-5699891,5699979-5700078,
           5700436-5700560,5700631-5700706,5701122-5701164
          Length = 176

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 535 KGKVTYXG-SGKPDVTFTISDEDVADLISGKLNPQKAF 425
           KG+VT     GKPD TF+ +D D   + +GK+NPQ AF
Sbjct: 57  KGEVTKGPYEGKPDATFSFTDSDFLSIATGKMNPQIAF 94


>05_02_0026 + 5716467-5716655,5716833-5718797
          Length = 717

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 103 FSFTYLLHFQVRT*IFCDLFIXFLHKK*KHLSFN*VRLIMSIK 231
           F F ++LH  +R  I+ D     L +K K++  N + LI S+K
Sbjct: 439 FEFVFVLHLMIRVLIWTDDLSCLLERKGKYI-VNPLELITSVK 480


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,497,754
Number of Sequences: 37544
Number of extensions: 200539
Number of successful extensions: 419
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)