Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_L23
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    27   0.53 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.6  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    25   2.1  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    25   2.1  

>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 26.6 bits (56), Expect = 0.53
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 102 FVSISICFNKCLLIITLLSFQRNIYK 25
           F S+SICF   ++  +   F+ N+Y+
Sbjct: 335 FFSLSICFGNIIMYSSYNKFRHNVYR 360


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 50   NNVIINKHLLKQILMETNFHLPIYYT-FKFEREYFVIYLFXSYI 178
            N+ I ++ + KQ + ETN ++ +Y+  F     +F + LF   I
Sbjct: 1520 NDAIDSRDVGKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVI 1563


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 102 FVSISICFNKCLLIITLLSFQRNIYK 25
           F S++ICF   ++  +   F  N+Y+
Sbjct: 329 FFSLTICFGNVMMYSSYNRFHNNVYR 354


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 102 FVSISICFNKCLLIITLLSFQRNIYK 25
           F S++ICF   ++  +   F  N+Y+
Sbjct: 329 FFSLTICFGNVMMYSSYNRFHNNVYR 354


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,039
Number of Sequences: 2352
Number of extensions: 7050
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)