Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_L22
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 387 e-106
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 223 3e-57
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 187 3e-46
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 177 2e-43
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 167 2e-40
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 159 8e-38
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 157 2e-37
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 140 4e-32
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 126 5e-28
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 124 2e-27
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 124 3e-27
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 120 4e-26
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 118 2e-25
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 110 4e-23
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 107 3e-22
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 101 2e-20
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 99 9e-20
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 92 1e-17
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 84 3e-15
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 82 1e-14
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 73 5e-12
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 73 9e-12
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 72 2e-11
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 70 6e-11
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 61 3e-08
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 55 2e-06
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 48 2e-04
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 48 2e-04
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 44 0.003
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.032
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.056
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.075
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 39 0.099
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 38 0.17
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 36 0.92
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 3.7
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_Q6IMG0 Cluster: GRP21; n=11; Eukaryota|Rep: GRP21 - Ara... 33 4.9
UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:... 33 4.9
UniRef50_Q2HF67 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 4.9
UniRef50_Q5QLZ3 Cluster: Gastric mucin-like protein; n=4; Oryza ... 33 6.5
UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep... 33 8.6
UniRef50_Q0J1B9 Cluster: Os09g0451700 protein; n=2; Oryza sativa... 33 8.6
UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2; ... 33 8.6
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 387 bits (952), Expect = e-106
Identities = 188/201 (93%), Positives = 188/201 (93%)
Frame = -1
Query: 603 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 424
LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC
Sbjct: 69 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 128
Query: 423 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 244
ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK
Sbjct: 129 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 188
Query: 243 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 64
HFNDDYF KEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD
Sbjct: 189 HFNDDYFKKNKKCVKRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 248
Query: 63 KKVLRGYLKAAFGLRSSQYPH 1
KKVLRGYLKAAFGLRSSQYPH
Sbjct: 249 KKVLRGYLKAAFGLRSSQYPH 269
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 223 bits (545), Expect = 3e-57
Identities = 112/197 (56%), Positives = 134/197 (68%)
Frame = -1
Query: 591 VKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLA 412
VK+IGG KNGG RTV LK+ K+ YPT+ ++ FS+H R R NL GTV ILLA
Sbjct: 65 VKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLA 124
Query: 411 GRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFND 232
GRH GKRVVL+ +L SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND
Sbjct: 125 GRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLND 184
Query: 231 DYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVL 52
YF DIFA KKE++VP+EQRK DQK VD A++K I A P+ K
Sbjct: 185 AYFRRLKAKKDKKTGEA---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFF 241
Query: 51 RGYLKAAFGLRSSQYPH 1
YL+ F L SSQYPH
Sbjct: 242 AKYLQNMFALHSSQYPH 258
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 187 bits (455), Expect = 3e-46
Identities = 98/203 (48%), Positives = 129/203 (63%), Gaps = 2/203 (0%)
Frame = -1
Query: 603 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 430
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 429 VCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKL 250
+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+
Sbjct: 149 ILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKI 208
Query: 249 PKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGAR 70
PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I A
Sbjct: 209 PKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAI 264
Query: 69 PDKKVLRGYLKAAFGLRSSQYPH 1
P L+GYL++ F L + YPH
Sbjct: 265 PQ---LQGYLRSVFALTNGIYPH 284
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 177 bits (432), Expect = 2e-43
Identities = 95/199 (47%), Positives = 127/199 (63%)
Frame = -1
Query: 597 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCIL 418
V+ K+IGG+KNGGTR V ++ FYP + + +K+ +IR +L+ GT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 417 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 238
LAG + GKRVVL+ L SGLLLV+GP N PLRR+ Q+ VI TSTRI + N K+P+H
Sbjct: 104 LAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHI 163
Query: 237 NDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKK 58
ND YF KEG DIFA+K E+Y P+EQRK DQ VD ++KAI A+PD
Sbjct: 164 NDTYF----RRHKVKKEAKEG-DIFASKPERYTPTEQRKKDQAEVDVQLLKAIKAQPDAA 218
Query: 57 VLRGYLKAAFGLRSSQYPH 1
+L YL+ FGL+++ PH
Sbjct: 219 MLVKYLRTIFGLKNNMIPH 237
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 167 bits (407), Expect = 2e-40
Identities = 91/201 (45%), Positives = 124/201 (61%), Gaps = 2/201 (0%)
Frame = -1
Query: 597 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVC 424
V VK++ GEKNGG R +PLK+ + YPT++ + + +S +P S+ +R + GTV
Sbjct: 67 VTVKRVKGEKNGGKRVLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVL 126
Query: 423 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 244
ILLAG H GKRVV + L +GLL VTGP+ N CPLRRI Q YVI TST++ L KLP+
Sbjct: 127 ILLAGPHRGKRVVFLKQLKTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPE 186
Query: 243 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 64
+D YF EG +IF K +++V SE+ K Q VD+ V++A+ A P+
Sbjct: 187 GLDDRYF--KRNKGPKRGRKDEG-EIFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPE 243
Query: 63 KKVLRGYLKAAFGLRSSQYPH 1
KK+L YL A F LR+ YPH
Sbjct: 244 KKMLLHYLAATFSLRNRMYPH 264
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 159 bits (385), Expect = 8e-38
Identities = 88/196 (44%), Positives = 115/196 (58%)
Frame = -1
Query: 588 KQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAG 409
K IGG+KNGG R VP++R +YPT++ +R R + ++R ++ GTV ILLAG
Sbjct: 54 KDIGGDKNGGKRVVPVQRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAG 111
Query: 408 RHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDD 229
H GKRVV + L SGLLLVTGPF N PLRRIPQ YVI TST I + + KLP+H
Sbjct: 112 AHRGKRVVFLKQLNSGLLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEH---- 167
Query: 228 YFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLR 49
F K +D+F E+ PSEQR DQK VD+ ++ I A P+ ++
Sbjct: 168 AFADESYFKGEPKKKKRSEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPN---MK 224
Query: 48 GYLKAAFGLRSSQYPH 1
YL + F LR Q+PH
Sbjct: 225 KYLSSLFSLRKGQFPH 240
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 157 bits (382), Expect = 2e-37
Identities = 84/185 (45%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Frame = -1
Query: 546 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 376
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H GKRV+ +
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Query: 375 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXX 196
L SGLLLVTGPF +N PLRR+ Q YVI TSTRI + F +PKH +D+YF
Sbjct: 114 ALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYF----RRVDL 169
Query: 195 XXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRS 16
+ +F+T+ +KY S+ RK DQK VD + AI + PD K+L YL++ F L
Sbjct: 170 KESKTDAGKLFSTETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLRSLFSLGK 229
Query: 15 SQYPH 1
YPH
Sbjct: 230 RDYPH 234
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 140 bits (338), Expect = 4e-32
Identities = 75/153 (49%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Frame = -1
Query: 456 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 280
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 279 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVD 100
++++ K+P+H ND+YF G +IFA+ K +Y SEQRK D KTVD
Sbjct: 127 LKVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEYTVSEQRKKDIKTVD 180
Query: 99 EAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 1
++ AI P+ K L GYL F L +QYPH
Sbjct: 181 APILAAIKKHPEHKFLFGYLGTRFSLGKNQYPH 213
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 126 bits (304), Expect = 5e-28
Identities = 77/182 (42%), Positives = 104/182 (57%)
Frame = -1
Query: 546 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 367
P+++ FYP ++ ++ R +K + +R ++ GTV I+LAGR GKRVV + L
Sbjct: 57 PVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLA 114
Query: 366 SGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 187
SGLLLVTGPF N PLRR+ Q YVIGTST++ + L K F+D YF
Sbjct: 115 SGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF---GKVAEKKKK 170
Query: 186 XKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 7
EG+ A K+EK + +K DQK VD A+IKAI A P+ L+ YL A F L+
Sbjct: 171 KTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPE---LKTYLGARFSLKQGMK 227
Query: 6 PH 1
PH
Sbjct: 228 PH 229
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 124 bits (300), Expect = 2e-27
Identities = 76/201 (37%), Positives = 103/201 (51%)
Frame = -1
Query: 603 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 424
+ ++ K IGG KNGG R VP K+ +YP +K + K + +RP++K GT+
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIV 78
Query: 423 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 244
ILLAG G RVV++ L SG LLVTGP+A N PL R+ QRYVI TST I + + K
Sbjct: 79 ILLAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-K 137
Query: 243 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 64
++ YF D ++K E R DQK +D ++ I P
Sbjct: 138 KIDNAYFRKPQKKKKTDVMEV---DTAKKDEQKTKAIEARIADQKAIDAVLLPVIEKEP- 193
Query: 63 KKVLRGYLKAAFGLRSSQYPH 1
+L YLK F L+ QYPH
Sbjct: 194 --LLSSYLKVKFSLKKGQYPH 212
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 124 bits (298), Expect = 3e-27
Identities = 66/132 (50%), Positives = 81/132 (61%)
Frame = -1
Query: 477 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 298
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 297 YVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKT 118
YVI T TRI + N K+P ND++F D IFA +++KY S+ RK
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFAEEEKKYTVSDDRKK 200
Query: 117 DQKTVDEAVIKA 82
QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 120 bits (288), Expect = 4e-26
Identities = 80/178 (44%), Positives = 102/178 (57%), Gaps = 3/178 (1%)
Frame = -1
Query: 525 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 349
FYP + K R S +P + ++R ++ GTV ILLAGR GKRVV + L SGLLLV
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLV 109
Query: 348 TGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDD 169
TGPF N P+RR+ Q YVI TST++ + + K F+D YF EG +
Sbjct: 110 TGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYF---SRDKKQKAKKTEG-E 164
Query: 168 IFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 1
+F T+KE K +P E +K DQK VD +IKAI A PD L+ YL A F LR PH
Sbjct: 165 LFETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPD---LKTYLGARFSLRDGDKPH 218
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 118 bits (283), Expect = 2e-25
Identities = 71/187 (37%), Positives = 99/187 (52%)
Frame = -1
Query: 561 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 382
G R + K K +IR+++ + K +R ++ GTV I+LAGR AGKRVV
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 381 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXX 202
+ L SGL+L+TGPF N PLRRI QRYVI TST+I + + K+ ND YF
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKST 171
Query: 201 XXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 22
D+ K EK ++ R DQK+VD A++ + +K L YLK F L
Sbjct: 172 TKSEGAFFSDE---KKAEKKKIADSRVADQKSVDSAILAVL---KKEKFLTVYLKTKFYL 225
Query: 21 RSSQYPH 1
+ ++PH
Sbjct: 226 KKGEFPH 232
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 110 bits (264), Expect = 4e-23
Identities = 64/167 (38%), Positives = 93/167 (55%)
Frame = -1
Query: 501 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSC 322
R S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGV 79
Query: 321 PLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKY 142
P+RR+ Y+I TST++ + + K F D+YF D TK +
Sbjct: 80 PVRRVNPAYIIATSTKVDVSKADVSK-FTDEYFKVDRSKLKKSKDAFM-DQGEETKVNRV 137
Query: 141 VPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 1
V SE+RK Q+ +D ++I +I + P ++ YLK F L S +PH
Sbjct: 138 V-SEERKKTQQALDASIIPSIQSNP---LMMSYLKTRFTLTSGMFPH 180
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 107 bits (256), Expect = 3e-22
Identities = 74/210 (35%), Positives = 107/210 (50%), Gaps = 10/210 (4%)
Frame = -1
Query: 600 TVVVKQIGGEKN--GGTRTVPLKRRKS--FYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 433
T+ K +G K G R +P +K+ +YP ++ + + + H ++RP+L+ G
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPG 61
Query: 432 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF- 256
T+ ILLAGR GKRV+L+ L G+LLVTGPF N PLRR+ RYVI TS+ + L
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDLNGVD 121
Query: 255 --KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIF---ATKKEKYVPSEQRKTDQKTVDEAV 91
L K +YF K+G++ F K EK + R DQK +D+A+
Sbjct: 122 QKTLEKVSQPEYF------TREKAEQKKGEEAFFKQGEKPEKKKVASARAADQKAIDQAL 175
Query: 90 IKAIGARPDKKVLRGYLKAAFGLRSSQYPH 1
+ I P L YL + F LR+ PH
Sbjct: 176 LATIKKEP---FLGSYLASTFSLRTGDKPH 202
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 101 bits (242), Expect = 2e-20
Identities = 65/180 (36%), Positives = 100/180 (55%)
Frame = -1
Query: 540 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 361
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 360 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 181
LL++GPF N PLRR+ RYVI TST++S+ + K FN +YF
Sbjct: 62 TLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYFAKEKLTKKEKKEA- 119
Query: 180 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 1
++F ++ K + +E R DQK VD+A+I I P +L+ YL A+F L++ PH
Sbjct: 120 ---NLFPEQQNKEIKAE-RVEDQKVVDKALIAEIKKTP---LLKQYLSASFSLKNGDKPH 172
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 99.1 bits (236), Expect = 9e-20
Identities = 50/120 (41%), Positives = 67/120 (55%)
Frame = -1
Query: 360 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 181
L GPF+ N P+RRI Q++V+ TST+I + K+P DDYF
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTKYFGK------ 63
Query: 180 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 1
E DIF K++Y ++ RK DQKT+D AV+ +I D K+L GYL+ FGL QYPH
Sbjct: 64 EKKDIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLRTNFGLSKRQYPH 123
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 91.9 bits (218), Expect = 1e-17
Identities = 72/204 (35%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Frame = -1
Query: 549 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 370
V L RRK+ K + GR ++ V ++R +LK G V ILL G + GKRVVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
Query: 369 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 190
SGLLLVTGPF+FN PLRR+ RYVI TST + ++ P++
Sbjct: 69 KSGLLLVTGPFSFNGVPLRRVNSRYVIATSTNV----YEFPEYDGSSLKSSVERAVSDLT 124
Query: 189 XXKEGDD------IFATKKEKYVPSEQRKTDQKTVDE------AVIKAIGARPD------ 64
G F +K+K + D+ +V E A +KA+ ++ D
Sbjct: 125 DESFGKTKETKLAEFKDRKKKNKNKDSMFVDEPSVSEKSPELMAKLKALQSKVDDVLVPS 184
Query: 63 -KKV--LRGYLKAAFGLRSSQYPH 1
KK L YLK+ F LR++ YPH
Sbjct: 185 LKKSQHLTKYLKSRFTLRNNMYPH 208
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 84.2 bits (199), Expect = 3e-15
Identities = 61/171 (35%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Frame = -1
Query: 504 IRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNS 325
+R RP + +R+I P G V ILL+GR GKRVV + L SGLLLVTGPF N
Sbjct: 44 VRKRKAPRPAT--LRKIVP----GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKING 97
Query: 324 CPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX---XKEGDDIFATK 154
PL+R+ YVI TST++ + NDDYF K G+ +
Sbjct: 98 VPLKRVNSAYVIPTSTKVDVTGVN-ANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQ 156
Query: 153 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 1
+ + ++ QK+VD A+I AI ++L+ YL A F + + PH
Sbjct: 157 TAEKTRLDGKRNTQKSVDAALITAI---KKTQLLKQYLGARFTIGKTTRPH 204
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 82.2 bits (194), Expect = 1e-14
Identities = 72/188 (38%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Frame = -1
Query: 483 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 310
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 309 IPQRYVIGTSTRISLGNF---KL-----PKHF---------NDDYFXXXXXXXXXXXXXK 181
+ RYVI TS ++ L K+ PK+F ++ F
Sbjct: 84 VNARYVIATSQKVDLAGIDEAKINEIAQPKYFTAEKSKEKAGEEAFFKQGEKPQVRLGNS 143
Query: 180 E------GDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKV--LRGYLKAAFG 25
E DI KKE S R DQK +D+A+I I KKV L YL ++F
Sbjct: 144 ELEHGAHNADIVMQKKE---VSSSRVADQKAIDKALIANI-----KKVEFLASYLASSFT 195
Query: 24 LRSSQYPH 1
LR PH
Sbjct: 196 LRKGDKPH 203
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 73.3 bits (172), Expect = 5e-12
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Frame = -1
Query: 594 VVKQIGGEKNGGTRTVPLKRRKSFYPTQEK--IRASSGGRPFS---KHV--RRIRPNLKI 436
VV G +KN V ++K P + K I GR + K V R++R ++++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 435 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI 271
G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I TST I
Sbjct: 77 GKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTSTNI 131
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 72.5 bits (170), Expect = 9e-12
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Frame = -1
Query: 456 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 280
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI TS
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATS 88
Query: 279 TRISLGN----------FKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSE 130
T + + + F+ PK ++ + +K + S+
Sbjct: 89 TTVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSD 148
Query: 129 QRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 1
R QK +D A+I AI K GYL++ F ++ PH
Sbjct: 149 ARAQLQKKIDAALIAAIKKDAQGKEKAGYLRSVFTVKPGDAPH 191
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = -1
Query: 432 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFK 253
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T T++ + K
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVK 72
Query: 252 LPKHFNDDYF 223
KH D F
Sbjct: 73 TSKHLTDASF 82
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 69.7 bits (163), Expect = 6e-11
Identities = 62/201 (30%), Positives = 96/201 (47%)
Frame = -1
Query: 603 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 424
+ V+K + G+KNGGT V L++ K + + + + S P KH + + N TV
Sbjct: 86 VATVIKTVSGDKNGGTGVVKLQKMKMYLGSCKAMAKS----PAFKHEKAVC-NSTPETVL 140
Query: 423 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 244
I++ G+H +RVV + L G LL+TGP A N L R Q+ V+ TST I+
Sbjct: 141 IIITGQH--RRVVFLKQLSRGFLLITGPLALNLVLLYRTHQKSVVITSTTINTQ------ 192
Query: 243 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 64
D YF + IF +K+KY +Q K D KT+D ++ P
Sbjct: 193 --TDVYF----KMKQLHKPRHQQGKIFDMEKDKY-GIKQCKADHKTLDSQIL------PK 239
Query: 63 KKVLRGYLKAAFGLRSSQYPH 1
+K+ +L ++F L + PH
Sbjct: 240 RKL---FLNSSFSLANGMCPH 257
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/75 (42%), Positives = 41/75 (54%)
Frame = -1
Query: 396 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 217
KRVV + L SGLLL+TG F N PLRR+ Q YVI TST++ + + K F+D YF
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDDKYFAK 214
Query: 216 XXXXXXXXXXXKEGD 172
+GD
Sbjct: 215 KVQKKRRSWALDKGD 229
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = -1
Query: 453 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 274
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I TST
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 273 ISL 265
I +
Sbjct: 109 IEV 111
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 48.4 bits (110), Expect = 2e-04
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = -1
Query: 510 EKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAF 331
EK +A + +P VRR +L G V ++L G A +RVV + L + L GP +
Sbjct: 10 EKYKARTARKP---RVRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSI 64
Query: 330 NSCPLRRIPQRYVIGTSTRISL 265
N PL RI +RY++ TST + L
Sbjct: 65 NGIPLFRIDERYLLATSTVLDL 86
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -1
Query: 153 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 1
KEKY +EQRK DQK VD ++ + P LRGYL+++F L YPH
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLRSSFCLSGGVYPH 50
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = -1
Query: 447 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRIS 268
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+ + +
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLK 100
Query: 267 LGNFKLPKHFNDDY 226
NF L KH N DY
Sbjct: 101 GLNF-LTKHTNKDY 113
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 40.7 bits (91), Expect = 0.032
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = -1
Query: 450 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 292
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHI 53
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.056
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -1
Query: 453 RPNLKIGTVCILLAGRHAGKRVVLVGILP 367
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.075
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -1
Query: 450 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 307
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 39.1 bits (87), Expect = 0.099
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = -1
Query: 525 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 346
FYP + ++ + +K ++ +R ++ GTV I+LAGR VV + L SGLLL+T
Sbjct: 207 FYPADD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR-----VVFLKQLSSGLLLIT 259
Query: 345 GPFAFNSCP 319
G F N P
Sbjct: 260 GSFKINDVP 268
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 38.3 bits (85), Expect = 0.17
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -1
Query: 444 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 265
+ IG V + + GR AG++ V+V I+ +++TGP RR+ ++ T +I +
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDI 64
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 35.9 bits (79), Expect = 0.92
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = -1
Query: 393 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGTSTRIS 268
+++++GI+P +L++ F F+S L IPQR +IGT+ I+
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATIT 258
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = -1
Query: 486 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 328
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 570 KNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 439
K R LK SF P + + ASS GRP K +R+R LK
Sbjct: 128 KEDHNREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_Q6IMG0 Cluster: GRP21; n=11; Eukaryota|Rep: GRP21 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1193
Score = 33.5 bits (73), Expect = 4.9
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = -2
Query: 290 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLS--SAKP 117
S P S+ + +S I+ +S S S + ++ P+ K ++ S S+KP
Sbjct: 1048 STKPKSKPSSKPTSKPSSKPISKPSTKSTSKPSSKSTSKPSTKPKSKPSSKPTSKPSSKP 1107
Query: 116 IRRQSTRL*SKPSEPDPTRRCSADTSKRPS 27
I + ST+ SKPS PT + S ++ +PS
Sbjct: 1108 ISKPSTKSTSKPSS-KPTSKPSTVSASKPS 1136
>UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1;
Glyptapanteles indiensis|Rep: Putative uncharacterized
protein - Glyptapanteles indiensis
Length = 1065
Score = 33.5 bits (73), Expect = 4.9
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = -2
Query: 275 EFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTR 96
++ S N ++I S + N QSN++ + T++P K+N+ H S+ P+ Q++
Sbjct: 523 QYMSINQNSFKQDLLIGSPE-NNIYNHQSNSRTIRTTIPSMKQNSTHPSN--PM-HQTSE 578
Query: 95 L*SKPSEPDPTRRCSADTSKRPS 27
L S+ + P ++ S S RPS
Sbjct: 579 L-SQQRQSQPNQQDSQQHSHRPS 600
>UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:
VpsB, putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 686
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 371 RIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPDEARI 505
R+P+ L A L A R Q P ++ +++ T + NG PP+ AR+
Sbjct: 397 RVPSPNKLRLAILYALRYQKSPSAQIPQVVSTLISNGVPPERARL 441
>UniRef50_Q2HF67 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 240
Score = 33.5 bits (73), Expect = 4.9
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2
Query: 263 ATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*S- 87
A + T ++ SRR S V S R+ S+P + RN +P ++Q T S
Sbjct: 20 APTRTSATLSLLCSRRHLPVS-VASTTTRLAHSIP-RPRNGSPFGQKQPQQQQQTITPSP 77
Query: 86 KPSEPDPTRRCSADTSKRP 30
PSEP PT +A +S +P
Sbjct: 78 SPSEPSPTAPATATSSPQP 96
>UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 331
Score = 33.5 bits (73), Expect = 4.9
Identities = 29/89 (32%), Positives = 42/89 (47%)
Frame = -2
Query: 287 APPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRR 108
AP S+TS+ QN S +SR ++++S+ S AKR K T SS+ P +R
Sbjct: 15 APSSTNGSSTSSAQNASGT-SSRTVKTSSS--SPAKRGDVKESSKPSRTVTASSSSPAKR 71
Query: 107 QSTRL*SKPSEPDPTRRCSADTSKRPSDS 21
SKPS T+ S+ S D+
Sbjct: 72 DDVNESSKPSR---TKAASSSNSAGGGDN 97
>UniRef50_Q5QLZ3 Cluster: Gastric mucin-like protein; n=4; Oryza
sativa|Rep: Gastric mucin-like protein - Oryza sativa
subsp. japonica (Rice)
Length = 579
Score = 33.1 bits (72), Expect = 6.5
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = -2
Query: 278 PEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQST 99
P ++ S S +I+S S N ++ + P K+ +T LSS+KP S
Sbjct: 73 PARSNSVSRPSIQSTLISSNNRSSVVNASISSVCSPPTTPSKRTST--LSSSKPSVPASR 130
Query: 98 RL*SKPSEPDPTRRCSADTSKRPS 27
++ ++PS P TR C+ RPS
Sbjct: 131 QVPTRPSTPTKTRPCT-PVKPRPS 153
>UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep:
Gll2249 protein - Gloeobacter violaceus
Length = 544
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -1
Query: 396 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDD 229
+ +V G + GL+L F S PL Q + +G +T +G LP+HFNDD
Sbjct: 41 QEIVTCGQVLKGLIL--NGLGFVSAPLYLFEQ-FFVGKATEHLIGPGVLPEHFNDD 93
>UniRef50_Q0J1B9 Cluster: Os09g0451700 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0451700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 180
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2
Query: 89 SKPSEPDPTRRCSADTSKRPS 27
++ S P+PTR CSA+ SKRPS
Sbjct: 13 TRSSPPNPTRTCSAEHSKRPS 33
>UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 986
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = -2
Query: 215 IRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTSK 36
+RS+S ++ + +RV+ S+ F +A P+R S+ KP E P +S
Sbjct: 563 LRSSSAIRKHRRRVIESVSDDDDPRFTTDTALPLREPSSNFIRKPQETAPLPSPPPTSSV 622
Query: 35 RPSDSARANI 6
PS A++
Sbjct: 623 APSSPPIASL 632
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,338,777
Number of Sequences: 1657284
Number of extensions: 14539188
Number of successful extensions: 44019
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 41977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43928
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -