Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_L20
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 53 2e-07
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 51 1e-06
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 50 1e-06
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 46 4e-05
01_06_1161 + 35002125-35002414,35002511-35002648,35003658-35004357 31 1.1
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 29 2.6
10_08_0236 + 16078162-16078731 29 2.6
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 29 2.6
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 29 2.6
07_01_0975 + 8223269-8224354 29 3.5
06_01_1039 - 8158929-8159023,8159663-8159966 29 4.6
03_05_0521 + 25160245-25160883 29 4.6
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 28 6.1
06_03_1207 + 28418473-28421073 28 6.1
03_05_0931 - 28912700-28913056,28913245-28913319,28913424-289134... 28 6.1
03_05_0198 + 21890523-21891002 28 6.1
08_01_0532 - 4611650-4612706,4613405-4613757 28 8.1
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408... 28 8.1
02_03_0102 - 15238808-15239437,15241609-15243264 28 8.1
01_05_0309 - 20713774-20713818,20713838-20713915,20714044-207142... 28 8.1
01_05_0291 - 20515206-20516262,20516961-20517313 28 8.1
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Frame = -2
Query: 679 MIEECGGIDKIEDLQTHEKMEIYKMAYDIIEQYFAGEEED---ASLVPAAGEAAFQF--D 515
MI+E G++KIE+LQ+H+ EIY+ A I+E Y+ EE+D A+ V A A F F
Sbjct: 460 MIDEAEGLEKIENLQSHDNNEIYEKAVKILEAYWMDEEDDTMGATTVAAPQGATFDFGQG 519
Query: 514 GGAA 503
GGAA
Sbjct: 520 GGAA 523
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = -2
Query: 679 MIEECGGIDKIEDLQTHEKMEIYKMAYDIIEQYFAGEEEDAS-LVPAAGEA 530
M++E G+DKIEDLQ H+ +EIY A ++E Y+ E++ L+P+ E+
Sbjct: 460 MVDEADGLDKIEDLQNHDNVEIYNKAVYVLESYWVQEDDQQPFLIPSVSES 510
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = -2
Query: 685 AXMIEECGGIDKIEDLQTHEKMEIYKMAYDIIEQYFAGEEEDASLVPAAGEAAFQFDGGA 506
A MI++ G++KIE+LQ+H+ EIY+ A ++E Y+ EE+DA +P+ A F+ G
Sbjct: 481 AQMIDDAEGLEKIENLQSHDNTEIYEKAVKMLESYWLEEEDDA--MPSGDNAQNGFNFGN 538
Query: 505 ADKEPP 488
P
Sbjct: 539 QQPNVP 544
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -2
Query: 685 AXMIEECGGIDKIEDLQTHEKMEIYKMAYDIIEQYFAGE-EEDASLVPAAGEAAFQFDGG 509
A I ECGG+DK+EDLQ + IYK+ ++E Y+ E +D +P + ++A +
Sbjct: 494 AQFILECGGLDKLEDLQEVDNDAIYKLVMKLLEGYWDEEVSDDDPNLPTSNDSAETVETA 553
Query: 508 AADKEPP 488
+ D P
Sbjct: 554 SEDAAQP 560
>01_06_1161 + 35002125-35002414,35002511-35002648,35003658-35004357
Length = 375
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 387 VFIRCLVSGAASVG*AWGQRGVGVGSAPSXKRKGGGSLSAAPPSNWKAASP-AAGTSDAS 563
+F R L+ A G + + + + + GGG+ +A PP W ++P AA + A+
Sbjct: 227 LFSRLLLPHAVGGGGSAAEEEAAIVTCLAAVISGGGAAAAPPPLIWPTSAPEAAFVASAA 286
Query: 564 SSSPA 578
SP+
Sbjct: 287 GHSPS 291
>11_01_0242 -
1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 447 GVGVGSAPSXKRKGGGSLSAAPPSNWKAASPAAGTSDASSSSP 575
G G G+ PS + G G APPS + S G SS P
Sbjct: 59 GGGYGAPPSTQPYGSGGGYGAPPSTQRPQSYGGGYGAPPSSQP 101
>10_08_0236 + 16078162-16078731
Length = 189
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +3
Query: 408 SGAASVG*AWGQRGVGVGSAPSXKRKGGGSLSAAPPSNWKAASPAAGTS 554
+G G GQ G G GS S G GS + +NW +S AG S
Sbjct: 113 AGGGGGGGGQGQAG-GYGSTGSGSGSGSGSGYSNANNNWYGSSAGAGAS 160
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 408 SGAASVG*AWGQRGVGVGSAPSXKRKGGGSLSAAPPSNWKAASPAAGTSDASSSSPA 578
SG A G +R G GS+ S + GG + K+A+ A T+ ++SSS A
Sbjct: 339 SGKAREGVVLLRRSSGKGSSGSQSKGGGNAGHERKSKGGKSAAAACSTAASASSSTA 395
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -2
Query: 679 MIEECGGIDKIEDLQTHEKMEIYKMAYDIIEQYFAGEE 566
++E GI+ +E Q HE ++ MA ++++YF GE+
Sbjct: 463 LVEMEDGIEAMERFQFHENEQMRNMANGLVDEYF-GED 499
>07_01_0975 + 8223269-8224354
Length = 361
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 417 ASVG*AWGQRGVGVGSAPSXKRKGGGSLSAAPPSNWKAASPAAGTSDASSSSPA 578
+ VG G G +PS GGS + PS+ ++SP++ S + SSSP+
Sbjct: 214 SDVGSGSGSAASAPGPSPSDDTGYGGS--SGSPSSSPSSSPSSSPSGSPSSSPS 265
>06_01_1039 - 8158929-8159023,8159663-8159966
Length = 132
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 432 AWGQRGVGVGSAPSXKRKGGGSL-SAAPPSNWKAASPAAGTSD 557
A G+RG G G+ S +R+GGG+L + A+PA + D
Sbjct: 2 AAGRRGRGSGTVRSRQRRGGGALRGVGGAAMGLCATPAMASPD 44
>03_05_0521 + 25160245-25160883
Length = 212
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 411 GAASVG*AWGQRGVGVGSAPSXKRKGGGSLSAAPPSNWKAASPA 542
GA +V AW RG G GS GGG S P A + A
Sbjct: 123 GATTVAGAWEGRGNGGGSRIQGMGGGGGGASLEPEEGAAAVAGA 166
>10_07_0130 + 13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = +3
Query: 432 AWGQRGVGVGSAPSXKRK----GGGSLSAAPPSN--W---KAASPAAG 548
+WG G G G+ +RK GG L+ +PPS+ W A SP +G
Sbjct: 877 SWGAEGWGGGAGSGAQRKDGGDGGAGLAPSPPSSPTWLREAALSPESG 924
>06_03_1207 + 28418473-28421073
Length = 866
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -1
Query: 221 TFLLWRRE*CSGHEPSVRPTSNCLCNVCLQIDYVCICLLVNTIFIGFLVVNEKIKMIIVK 42
T+ L R G P+V S+ + C CLL++ + L NE I +++K
Sbjct: 684 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 743
Query: 41 RCCD 30
CCD
Sbjct: 744 CCCD 747
>03_05_0931 -
28912700-28913056,28913245-28913319,28913424-28913497,
28913604-28913691,28913785-28913936,28914050-28914209,
28914303-28914458,28914566-28914784,28915390-28915650,
28917183-28917389,28917488-28917619
Length = 626
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 447 GVGVGSAPSXKRKGGGS-LSAAPPSNWKAASPAAGTSDASSSS 572
G G G R GG LSAA P N+ A S G SSS
Sbjct: 581 GSGAGHCGEFFRSGGARRLSAAAPFNYVAVSKGGGGGGGLSSS 623
>03_05_0198 + 21890523-21891002
Length = 159
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +3
Query: 426 G*AWGQRGVGVGSAPSXKRK-----GGGSLSAAPPSNWKAASPAAGTSDASS 566
G + G G G GSAP R+ GGG+ A S+W+ + AA S+
Sbjct: 60 GRSGGDGGRGSGSAPVPARQWSGGGGGGARIRASSSSWREGAAAAAEGHGSA 111
>08_01_0532 - 4611650-4612706,4613405-4613757
Length = 469
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 408 SGAASVG*AWGQRGVGVGSAP-SXKRKGGGSLSAAPPSNWKAAS 536
S A++ + G RGVG+ P S R GG +++A PP + + S
Sbjct: 35 SATAALPFSRGGRGVGLAPPPRSLGRGGGPAVAAIPPGGFPSYS 78
>06_03_0930 -
26038341-26038508,26039114-26039254,26040799-26040858,
26040972-26041034,26041444-26041454,26041722-26041802,
26042783-26043020,26043563-26043997
Length = 398
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 432 AWGQRGVGVGSAPSXKRKGGGSLSAAPPSNWKAASPAA 545
AW G S S +R GS SAA W SPA+
Sbjct: 53 AWPTVARGKRSRSSRRRSPSGSGSAATKGRWARGSPAS 90
>02_03_0102 - 15238808-15239437,15241609-15243264
Length = 761
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 468 PSXKRKGGGSLSAAPPSNWKAASPAAGTSDASSSSPA 578
P R L +APP AAS AA D+SSS+ A
Sbjct: 78 PDLDRAAASLLRSAPPLLSLAASDAAALRDSSSSTAA 114
>01_05_0309 -
20713774-20713818,20713838-20713915,20714044-20714222,
20714296-20714556,20715222-20715393,20715501-20715662,
20716435-20716863,20717729-20717785,20717872-20718842,
20719098-20719182,20719269-20719637,20719756-20720001,
20720090-20720362,20720663-20720827,20721328-20721556,
20721727-20722168,20723152-20724138,20724352-20724517,
20725070-20725728,20725820-20726186
Length = 2113
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 462 SAPSXKRKGGGSLSAAPPSNWKAASPAAGTSDAS 563
SA S R+GGG L+AA S+ PA +S S
Sbjct: 91 SAVSWCRRGGGELAAAAGSSVSVFQPAPSSSPGS 124
>01_05_0291 - 20515206-20516262,20516961-20517313
Length = 469
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 408 SGAASVG*AWGQRGVGVGSAP-SXKRKGGGSLSAAPPSNWKAAS 536
S A++ + G RGVG+ P S R GG +++A PP + + S
Sbjct: 35 SATAALPFSRGGRGVGLAPPPRSLGRGGGPAVAAIPPGGFPSYS 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,240,734
Number of Sequences: 37544
Number of extensions: 282952
Number of successful extensions: 1588
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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