Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_L19
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.19
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.25
SPAC3A12.11c |cwf2|prp3|RNA-binding protein Cwf2|Schizosaccharom... 30 0.25
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 29 0.58
SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cu... 28 1.3
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 27 1.8
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 1.8
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 27 3.1
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 26 4.1
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 26 4.1
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 26 4.1
SPCC777.07 |||alpha-1,2-mannosyltransferase |Schizosaccharomyces... 26 4.1
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 26 5.4
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 26 5.4
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 25 7.2
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 7.2
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 7.2
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 25 9.5
SPBPB21E7.07 |aes1|SPAPB21E7.07, SPAPB21E7.07|enhancer of RNA-me... 25 9.5
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 25 9.5
SPCC777.13 |vps35||retromer complex subunit Vps35|Schizosaccharo... 25 9.5
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.19
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 648 PYQPQYXGPLPS-PG-QQPIYPTQQFNQTQMPPHYPNQNVYPYPSPLQPWFPG 496
P PQ G P PG QQP+ P + Q P Q + P + +QP PG
Sbjct: 644 PMMPQRTGMQPQMPGMQQPMAPQRTGMQPMAPQRTGMQPMMPQRTGMQPQMPG 696
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.25
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Frame = -2
Query: 645 YQPQYXGPLPSPGQQP--IYPTQQFNQTQMPPHYPNQN-----VYPYPSPLQPWFPGQIP 487
Y P+ PLP+P P P Q N +Q+P N N V P P P P + P
Sbjct: 227 YTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Query: 486 ANGNHTQNG 460
N + G
Sbjct: 287 TNASTRSTG 295
>SPAC3A12.11c |cwf2|prp3|RNA-binding protein
Cwf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 30.3 bits (65), Expect = 0.25
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -2
Query: 276 YYNNYDGSNPQAPVCSQPCLNGVCVEGNRCSCNTGYVTDSMDPSGFRCIPHCAGGCPNG 100
+YN + G Q P+ SQ CV S ++GY +P F C+ G C G
Sbjct: 74 WYNKWSGGMRQDPLKSQVKSETRCV----ISRDSGYTKADKNPGSFFCLYFARGMCSEG 128
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 29.1 bits (62), Expect = 0.58
Identities = 23/69 (33%), Positives = 28/69 (40%)
Frame = -2
Query: 624 PLPSPGQQPIYPTQQFNQTQMPPHYPNQNVYPYPSPLQPWFPGQIPANGNHTQNGFLDLS 445
P P P Q YP Q + P +YP Q Y P QP + ++G LS
Sbjct: 100 PQPYPPQGG-YPQQPYYYPNQPNYYPAQPAYAQPVYAQP------ATSARRGRSGV--LS 150
Query: 444 NRTVPGQGG 418
N V G GG
Sbjct: 151 NPMVTGLGG 159
>SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cuf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -2
Query: 645 YQPQYXGPLPSPGQQPI-YPTQ-QFNQTQMPPH 553
Y P Y L SP QQP +P + Q+N + P H
Sbjct: 181 YPPNYNNYLKSPYQQPTNFPPEIQYNYSHSPQH 213
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -2
Query: 183 CNTGYVTDSMDPSGFRCIPHCAGGCPNGVCSAPNLCICNMGY 58
C++G S G C PN +C +PN C GY
Sbjct: 348 CDSGASGSSASILGISFPSLCRTCPPNAICPSPNYVECKPGY 389
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = -2
Query: 645 YQPQYXGPLPSPGQQPIYPTQQFNQTQMPPHYPNQNVYPYPSPLQPWFPGQIP 487
Y P P+P P YP + MP + + YPY P P +P
Sbjct: 720 YVPNTYSPVPFP-YNTSYPPYMSPTSNMPQAFQAYSQYPYQHPPFPLSEQMLP 771
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Frame = -2
Query: 642 QPQYXG---PLPSPGQQPIYPTQQFNQTQMPPHYP--NQNVYPYPSPLQPWFPGQIPANG 478
QP Y G P P+ P Q P P + P PSP +P P
Sbjct: 524 QPSYQGMQFEQQQPTTIPLQPNIPVLNQQYPVMIPAMEDSRGPLPSPAHIMYPEGSPGFI 583
Query: 477 NHTQNGF 457
H+ NGF
Sbjct: 584 QHSPNGF 590
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 26.2 bits (55), Expect = 4.1
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 10/58 (17%)
Frame = -2
Query: 600 PIYPTQQFNQTQMPPHYP-----NQNVYPYPSPLQ-PWFPGQIPANGNH----TQNGF 457
P PTQ + PPH+P + N YP P Q P PG +H + NGF
Sbjct: 162 PFPPTQHHHPHTRPPHHPPHPHFHNNNYPPPYCFQSPVSPGATVPLQHHSPYPSDNGF 219
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 26.2 bits (55), Expect = 4.1
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +3
Query: 381 KADTDSSLDGEGSHLDQVQCDWISPGSRF 467
K + L S ++Q++CDW++ +F
Sbjct: 1118 KGVIEKCLSSVASRINQIKCDWVTDPEKF 1146
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 615 SPGQQPIYPTQQFNQTQMPPHYPNQN 538
SP QP QQ +T PP+ PN N
Sbjct: 314 SPQDQPSTQQQQPQRTAAPPNNPNVN 339
>SPCC777.07 |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 378
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 70 TDAQVWCRADTIRTPSGTVRYAPKSTGVHTISDISS 177
TD Q A + P+GT+ Y P S + + +I+S
Sbjct: 343 TDVQSHATARCLCDPTGTIDYLPFSCAIKWLENINS 378
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -2
Query: 618 PSPGQQPIYPTQQF--NQTQMPPHYPNQNVYPYPSPLQP 508
P+ G QP+YPT F + + +PN P L P
Sbjct: 113 PTQGGQPLYPTNFFTTSVSASSDSFPNSPTVPSKFSLNP 151
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +1
Query: 100 TIRTPSGTVRYAPKSTGVHTISDISSVAGASVAF 201
T+ PS YAP T S SSV + F
Sbjct: 578 TVNNPSAVSNYAPTVLSASTTSGTSSVRAKPIVF 611
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 462 GFLDLSNRTVPGQG 421
GF DL++RT+PG G
Sbjct: 197 GFYDLAHRTLPGNG 210
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -2
Query: 651 SPYQPQYXGPLPSPGQQPI-YPTQQFNQTQMPPHYPNQNVYPYPSPLQP 508
S QP PLP+ I P QQ Q+Q P P Q + P QP
Sbjct: 144 SSNQPIQQLPLPNQASPYIPVPLQQQQQSQ-PQQQPQQQQHQQPQQPQP 191
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -2
Query: 633 YXGPLPSP-GQQPIYPTQQFNQTQMPPHYPNQNVYPYP 523
Y GP +P G +P TQ PPH Q P+P
Sbjct: 26 YTGPYLTPSGTMAYHPGNAPLFTQAPPHTNPQGPPPFP 63
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 585 QQFNQTQMPPHYPNQNVYPYPSPLQPWFP-GQIPANGNH 472
QQ N Q YP+Q P + PW P Q +N NH
Sbjct: 325 QQMNLQQGIQGYPHQGYMPTQNIGFPWPPTPQFVSNWNH 363
>SPBPB21E7.07 |aes1|SPAPB21E7.07, SPAPB21E7.07|enhancer of
RNA-mediated gene silencing |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 324 IRSWTDWAENIPVEDTTVDKAD 389
I WT+ +E V+ T+DKAD
Sbjct: 39 IAKWTNLSETTFVQKPTIDKAD 60
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 276 SPHVRNLCLVLVAAHSIRSWTDWAENIPVEDTTVDKADTDSSLDGEGSHLDQVQCDWIS 452
S ++N+C + + +++ E TVD SS+ H+D V +WIS
Sbjct: 103 SDEIKNICGLPPGPMKVEQIGHAIDHLVSETHTVDHLG--SSIKASFFHIDDVPLEWIS 159
>SPCC777.13 |vps35||retromer complex subunit
Vps35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 210 LRSDKAESIQAPEDLTRHNCYNSPHVRNLCLVLVAAHSIRSWTDWAENI 356
LRS K I+A E++ Y P V N C+ L I DWAE +
Sbjct: 487 LRSLKDTFIKAGENVK----YLLPVVVNRCIFLARNFRIFKCMDWAEKV 531
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,660,912
Number of Sequences: 5004
Number of extensions: 56710
Number of successful extensions: 188
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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