Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_L04
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   3.4  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   3.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   7.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   7.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.8  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 193 NIDLNETW*RNTPLDNIVTCICD 125
           NIDLN+    +  L N V C+ D
Sbjct: 28  NIDLNQILKSDRLLKNYVNCLLD 50


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 193 NIDLNETW*RNTPLDNIVTCICD 125
           NIDLN+    +  L N V C+ D
Sbjct: 28  NIDLNQILKSDRLLKNYVNCLLD 50


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -2

Query: 567 FRXVNSLALVDRVSAYVVGQSPSLIAQSVRP*RLYSVKQTPATAPGEESYYFLYSCFRFP 388
           FR +NS A V      + G   +LIA    P  ++ V+     +   E Y F+ +  + P
Sbjct: 346 FRMINSFASVCPAQLTIQGHDLTLIATDGEP--VHPVRVNTIISFSGERYDFVINADQTP 403


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -2

Query: 567 FRXVNSLALVDRVSAYVVGQSPSLIAQSVRP*RLYSVKQTPATAPGEESYYFLYSCFRFP 388
           FR +NS A V      + G   +LIA    P  ++ V+     +   E Y F+ +  + P
Sbjct: 346 FRMINSFASVCPAQLTIQGHDLTLIATDGEP--VHPVRVNTIISFSGERYDFVINADQTP 403


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 499 PYCPISTPLTLVLGQTDPGNCPR 431
           P C  S   T + GQ +P N P+
Sbjct: 163 PDCFCSADGTRIPGQLEPANVPQ 185


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 499 PYCPISTPLTLVLGQTDPGNCPR 431
           P C  S   T + GQ +P N P+
Sbjct: 170 PDCFCSADGTRIPGQLEPANVPQ 192


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory
          receptor candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 39 YPHRVHSKF 65
          +PHR+HS F
Sbjct: 22 FPHRIHSYF 30


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory
          receptor candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 39 YPHRVHSKF 65
          +PHR+HS F
Sbjct: 22 FPHRIHSYF 30


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 506 HPALLPNQYAPDACTRSNRPRQLPPARS 423
           HP LLP  +  ++      P +LP  +S
Sbjct: 58  HPGLLPLAWQANSPPSPPAPSELPALKS 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,024
Number of Sequences: 336
Number of extensions: 2795
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)