Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_L02
         (612 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q09F57 Cluster: Ymf61; n=2; Tetrahymena|Rep: Ymf61 - Te...    33   4.0  
UniRef50_UPI0000DB7C05 Cluster: PREDICTED: similar to CG12006-PA...    33   5.3  
UniRef50_Q7RND4 Cluster: Chloroquine resistance marker protein; ...    33   7.1  
UniRef50_Q7RS84 Cluster: TERT; n=10; Eukaryota|Rep: TERT - Plasm...    32   9.3  

>UniRef50_Q09F57 Cluster: Ymf61; n=2; Tetrahymena|Rep: Ymf61 -
           Tetrahymena paravorax
          Length = 241

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 188 VNSYLNAKNVTGFFYFSNKYCFLKIKKIRNVKKTLT 295
           +N Y    N+  ++  SN Y  LK KKIR++K+ LT
Sbjct: 195 LNKYFRITNIITYYNISNSY--LKFKKIRSIKRRLT 228


>UniRef50_UPI0000DB7C05 Cluster: PREDICTED: similar to CG12006-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG12006-PA, isoform A - Apis mellifera
          Length = 446

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = +2

Query: 299 LNFTVKLLFYVWTCVFRSYKT*CS*LISVTYYYVKT*LLFDYTLKINDITSLTQK--QIF 472
           L F    L + WT   R+Y      L+S+ Y  + T +  DY + +  +  + Q     +
Sbjct: 37  LAFGYGYLTWEWTMKIRNYIY--PFLLSIIYR-ILTLICMDYVIILTTVPRILQAIFSAY 93

Query: 473 GYNTFYWWLHVKRSQCSTCYQYYYFY 550
           G   FY W   K +  S C  +Y++Y
Sbjct: 94  GEYKFYEWTKNKWTLYSLCINWYWYY 119


>UniRef50_Q7RND4 Cluster: Chloroquine resistance marker protein;
           n=5; Plasmodium (Vinckeia)|Rep: Chloroquine resistance
           marker protein - Plasmodium yoelii yoelii
          Length = 1955

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +2

Query: 194 SYLNAKNVTGFFYFSNKYCFLKIKKIRNVKKTLTILNF 307
           +Y+N +N+ GFF+ +NK    KI K R  K  L+I NF
Sbjct: 161 NYVNPENINGFFFQNNKQFNKKIVKKR--KSPLSIYNF 196


>UniRef50_Q7RS84 Cluster: TERT; n=10; Eukaryota|Rep: TERT - Plasmodium
            yoelii yoelii
          Length = 2111

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = +2

Query: 167  NSNV*L*VNSYLNAKNVTGFFYFSNKYCFLKIKKIRNVKKTLTILNFTVKLLF 325
            N N+   VN   N KN        NKY  LKI +I+ V KTL I    +K  F
Sbjct: 1779 NENIKTIVNGQKNEKNKNKLKLRKNKYSKLKICQIKKVIKTLCIKKVKLKEKF 1831


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,319,609
Number of Sequences: 1657284
Number of extensions: 7529245
Number of successful extensions: 17423
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17305
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)