Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_L02
         (612 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087081-14|AAK66032.1|  250|Caenorhabditis elegans Hypothetical...    33   0.12 
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr...    31   0.49 
AC087081-16|AAG37970.1|  252|Caenorhabditis elegans Hypothetical...    31   0.65 
AC087081-17|AAG37969.1|  235|Caenorhabditis elegans Hypothetical...    30   1.5  
Z77668-3|CAI46576.1|  284|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z77655-9|CAI46567.1|  284|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z68105-4|CAA92120.2|  304|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>AC087081-14|AAK66032.1|  250|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.5 protein.
          Length = 250

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 242 KYCFLKIKKIRNVKKTLTILNFTVKLLFYVWTCVF 346
           KY F K  K+ N++K   IL FT+  ++Y++ C +
Sbjct: 131 KYTFPKTTKLTNLQKVSIILFFTIMEVYYIYLCTW 165


>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
           protein C05C9.3 protein.
          Length = 1225

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 11/23 (47%), Positives = 19/23 (82%)
 Frame = +2

Query: 419 DYTLKINDITSLTQKQIFGYNTF 487
           DY ++I++I ++TQ+Q+ GY TF
Sbjct: 403 DYDMEISEIETITQRQLEGYGTF 425


>AC087081-16|AAG37970.1|  252|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.3 protein.
          Length = 252

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 242 KYCFLKIKKIRNVKKTLTILNFTVKLLFYVWTCVF 346
           KY F K  K+ N++K    + FT+  ++Y++ C +
Sbjct: 134 KYTFPKTTKLTNLQKVSIFIFFTIMEVYYIYLCTW 168


>AC087081-17|AAG37969.1|  235|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.2 protein.
          Length = 235

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 242 KYCFLKIKKIRNVKKTLTILNFTVKLLFYVWTCVF 346
           KY F K  K+ N++K      FT+  ++Y++ C +
Sbjct: 117 KYTFPKTTKLTNLQKVSIFTFFTIMEVYYIYLCTW 151


>Z77668-3|CAI46576.1|  284|Caenorhabditis elegans Hypothetical
           protein R11G10.3 protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +1

Query: 364 MFVINFSDILLRENLITFRLHXKNK*HYFFNSKTNFWLQYFLLVAS 501
           +FVI+F  +LL      F L  +N   +FF ++  F +  F+L+++
Sbjct: 51  LFVISFFLVLLAHTTSNFILFFRNLLEFFFINQLLFSILEFILISA 96


>Z77655-9|CAI46567.1|  284|Caenorhabditis elegans Hypothetical
           protein R11G10.3 protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +1

Query: 364 MFVINFSDILLRENLITFRLHXKNK*HYFFNSKTNFWLQYFLLVAS 501
           +FVI+F  +LL      F L  +N   +FF ++  F +  F+L+++
Sbjct: 51  LFVISFFLVLLAHTTSNFILFFRNLLEFFFINQLLFSILEFILISA 96


>Z68105-4|CAA92120.2|  304|Caenorhabditis elegans Hypothetical
           protein F13E6.5 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 379 FSDILLRENLITFRLHXKNK*HYFFNSKTNFWLQYFLLVASC 504
           F  + L E ++ F+    N+   FF++ T  +L+Y L+ A+C
Sbjct: 98  FLIVALVEAILHFKSKGSNRLAKFFSATTITYLKYLLMYAAC 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,950,429
Number of Sequences: 27780
Number of extensions: 191606
Number of successful extensions: 429
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)