Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_K12
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    26   0.89 
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   2.7  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    23   8.3  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    23   8.3  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.3  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 515 GTSPTGRRHLHRRPSTCRGTRPLTS 589
           G+SP   RH+  RP  C G    T+
Sbjct: 409 GSSPDSIRHMQGRPGGCNGLHSTTA 433


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/46 (23%), Positives = 17/46 (36%)
 Frame = +1

Query: 331 CNSCVSTSAVTCAGAVSSVCDLRSQM*HHQYSCFSCGKYGQCTGCE 468
           CN C +     C G    +C   +      +S  +C      TGC+
Sbjct: 559 CNECATIDGSICGGPDHGICTCGTCSCFDSWSGDNCECTTDTTGCK 604


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 275 RSDSYIGMDQQQDMKLDVKEAAAVPAE 195
           RSD  +  D  +D  LDV+E+    A+
Sbjct: 206 RSDPALAKDSSEDKALDVEESENTNAD 232


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -1

Query: 462 PGTLSVLPAGEAGVLVV--LHLRPQV 391
           PGT SVL AG A ++ V  +H  P+V
Sbjct: 384 PGTKSVLEAGTAVMIPVHAIHHDPEV 409


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 449 PYFPQEKQEYWW 414
           PY+  + Q YWW
Sbjct: 300 PYYQTKPQVYWW 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,815
Number of Sequences: 2352
Number of extensions: 8456
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)