Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_K10
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53181-6|AAA93486.1| 224|Caenorhabditis elegans Hypothetical pr... 34 0.056
U97552-2|AAB52862.1| 141|Caenorhabditis elegans Human sedl (spo... 29 1.6
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 28 4.9
U64851-1|AAC47990.2| 186|Caenorhabditis elegans Ground-like (gr... 28 4.9
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 28 4.9
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 28 4.9
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 28 4.9
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 28 4.9
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 28 4.9
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 27 8.6
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 27 8.6
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 27 8.6
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 27 8.6
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 27 8.6
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 27 8.6
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 27 8.6
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 27 8.6
AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical ... 27 8.6
>U53181-6|AAA93486.1| 224|Caenorhabditis elegans Hypothetical
protein F36D4.2 protein.
Length = 224
Score = 34.3 bits (75), Expect = 0.056
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -3
Query: 308 LFSTDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALYAD-AICNPFH 132
+ T K++ + T +K V++TS+ S ++ + L +++ LY D A+ NPF+
Sbjct: 141 VLETTQFKLFCLQSRTGVKFVVITSAASNIAAD-------SLLSKMYELYTDFALKNPFY 193
Query: 131 LPGDQITSPKFDKQVKXIM 75
I + KFD+ +K ++
Sbjct: 194 SIDMPIRAQKFDEAIKTLL 212
>U97552-2|AAB52862.1| 141|Caenorhabditis elegans Human sedl
(spondyloepiphysealdysplasia tarda) related protein 1
protein.
Length = 141
Score = 29.5 bits (63), Expect = 1.6
Identities = 29/146 (19%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Frame = -3
Query: 512 AVIGKDNSPLYIGG--IGNDTSSDNELSRQ---WLVHTALDALEERLTTANPNNSGTNTT 348
A+IG + P++ +G + ++E +R ++ H ALD ++E T +
Sbjct: 9 AIIGHCDQPIFEMDFPVGEKKTKESEGTRHLNHYIGHAALDIVDEHALTTS--------- 59
Query: 347 TARTDLRDLYLGLLFSTDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLH 168
+YL ++ + + +VT +RI+ +++ + + G ++ + ++
Sbjct: 60 -------QMYLKMVDKFNEWYVSAFVTASRIRFIMLHTHRADEG-------IKQFFQEMY 105
Query: 167 ALYADAICNPFHLPGDQITSPKFDKQ 90
Y NPF+ D I SP F+++
Sbjct: 106 ETYIKHAMNPFYEIDDVIESPAFEQK 131
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 521 VCVAVIGKDNSPLYIGGIG 465
VC A I +DNS +Y GG G
Sbjct: 325 VCAATISRDNSRVYTGGKG 343
>U64851-1|AAC47990.2| 186|Caenorhabditis elegans Ground-like (grd
related) protein12 protein.
Length = 186
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -1
Query: 478 LVASATTPAATMSCPGSGSCTRRWTPWRRGSPLRILTIQERTQPLPELICGTC 320
L+ SA A S G +C TP P L I T P P C TC
Sbjct: 10 LLFSAPASAFFNSLFGGSNCGCSCTPPPSTCPTTCLPIMTCTPPSPPACCNTC 62
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 449 DNELSRQWLVHTALDALEERLTTANPNNS 363
D+EL + LV T L A+ R+T NP++S
Sbjct: 424 DSELPDEVLVDTKLHAIAARITCENPDDS 452
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 449 DNELSRQWLVHTALDALEERLTTANPNNS 363
D+EL + LV T L A+ R+T NP++S
Sbjct: 424 DSELPDEVLVDTKLHAIAARITCENPDDS 452
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 521 VCVAVIGKDNSPLYIGGIG 465
VC A I +DNS +Y GG G
Sbjct: 325 VCAATISRDNSRVYTGGKG 343
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 521 VCVAVIGKDNSPLYIGGIG 465
VC A I +DNS +Y GG G
Sbjct: 325 VCAATISRDNSRVYTGGKG 343
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 521 VCVAVIGKDNSPLYIGGIG 465
VC A I +DNS +Y GG G
Sbjct: 325 VCAATISRDNSRVYTGGKG 343
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 381 SGEPLLQGVQRRVHEPLPGQLIVAAGVVADATNVQRRIIFSD 506
+ EPL R+H P+P Q ++A AT+V +I D
Sbjct: 103 TAEPLPSPAATRIHHPIPVQ--YNTDLIAAATSVNSNVILVD 142
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 381 SGEPLLQGVQRRVHEPLPGQLIVAAGVVADATNVQRRIIFSD 506
+ EPL R+H P+P Q ++A AT+V +I D
Sbjct: 103 TAEPLPSPAATRIHHPIPVQ--YNTDLIAAATSVNSNVILVD 142
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 27.1 bits (57), Expect = 8.6
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 332 LRDLYLGLL-FSTDTHKIYGYVTNTRIKLVLVTS--STSPSGSNIRDAEVRTALRRLHAL 162
+RDL G+L + Y T + + V V S STS G N + +V + LR +++
Sbjct: 1506 IRDLTAGMLPLGLGVSEAYSVGTLSTARSVSVRSGASTSSGGENRQSQDVESLLRHRYSV 1565
Query: 161 YADAICNPFHLPGDQITSPKFDKQVK 84
++ C+ I + FD QV+
Sbjct: 1566 HS---CDSEQSSEVWIVTADFDGQVE 1588
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.1 bits (57), Expect = 8.6
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 332 LRDLYLGLL-FSTDTHKIYGYVTNTRIKLVLVTS--STSPSGSNIRDAEVRTALRRLHAL 162
+RDL G+L + Y T + + V V S STS G N + +V + LR +++
Sbjct: 1506 IRDLTAGMLPLGLGVSEAYSVGTLSTARSVSVRSGASTSSGGENRQSQDVESLLRHRYSV 1565
Query: 161 YADAICNPFHLPGDQITSPKFDKQVK 84
++ C+ I + FD QV+
Sbjct: 1566 HS---CDSEQSSEVWIVTADFDGQVE 1588
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.1 bits (57), Expect = 8.6
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 332 LRDLYLGLL-FSTDTHKIYGYVTNTRIKLVLVTS--STSPSGSNIRDAEVRTALRRLHAL 162
+RDL G+L + Y T + + V V S STS G N + +V + LR +++
Sbjct: 1506 IRDLTAGMLPLGLGVSEAYSVGTLSTARSVSVRSGASTSSGGENRQSQDVESLLRHRYSV 1565
Query: 161 YADAICNPFHLPGDQITSPKFDKQVK 84
++ C+ I + FD QV+
Sbjct: 1566 HS---CDSEQSSEVWIVTADFDGQVE 1588
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
C37C3.6c protein.
Length = 1487
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 158 ADAICNPFHLPGDQITSPKFDKQ 90
AD CN FH G Q T+ +FD +
Sbjct: 1397 ADGTCNRFHYGGCQGTNNRFDNE 1419
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 158 ADAICNPFHLPGDQITSPKFDKQ 90
AD CN FH G Q T+ +FD +
Sbjct: 1468 ADGTCNRFHYGGCQGTNNRFDNE 1490
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 158 ADAICNPFHLPGDQITSPKFDKQ 90
AD CN FH G Q T+ +FD +
Sbjct: 1468 ADGTCNRFHYGGCQGTNNRFDNE 1490
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73B protein.
Length = 1638
Score = 27.1 bits (57), Expect = 8.6
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 332 LRDLYLGLL-FSTDTHKIYGYVTNTRIKLVLVTS--STSPSGSNIRDAEVRTALRRLHAL 162
+RDL G+L + Y T + + V V S STS G N + +V + LR +++
Sbjct: 1506 IRDLTAGMLPLGLGVSEAYSVGTLSTARSVSVRSGASTSSGGENRQSQDVESLLRHRYSV 1565
Query: 161 YADAICNPFHLPGDQITSPKFDKQVK 84
++ C+ I + FD QV+
Sbjct: 1566 HS---CDSEQSSEVWIVTADFDGQVE 1588
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 27.1 bits (57), Expect = 8.6
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 332 LRDLYLGLL-FSTDTHKIYGYVTNTRIKLVLVTS--STSPSGSNIRDAEVRTALRRLHAL 162
+RDL G+L + Y T + + V V S STS G N + +V + LR +++
Sbjct: 1506 IRDLTAGMLPLGLGVSEAYSVGTLSTARSVSVRSGASTSSGGENRQSQDVESLLRHRYSV 1565
Query: 161 YADAICNPFHLPGDQITSPKFDKQVK 84
++ C+ I + FD QV+
Sbjct: 1566 HS---CDSEQSSEVWIVTADFDGQVE 1588
>AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical
protein Y92H12A.5 protein.
Length = 1375
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 166 LCTLTPYAIHSIYPVIKLLHRNSTSK 89
L T+T IHSI +I+LL RN T K
Sbjct: 597 LLTITTLPIHSILNMIELLLRNPTWK 622
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,310,959
Number of Sequences: 27780
Number of extensions: 250850
Number of successful extensions: 721
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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