BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_K03
(775 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051948-1|AAK93372.1| 382|Drosophila melanogaster LD42063p pro... 29 9.4
AJ243264-1|CAB53640.1| 1035|Drosophila melanogaster putative orp... 29 9.4
AE014298-1163|AAF46360.3| 382|Drosophila melanogaster CG1636-PA... 29 9.4
AE014296-2901|AAN11709.1| 809|Drosophila melanogaster CG3897-PC... 29 9.4
AE014296-2900|AAF49348.2| 769|Drosophila melanogaster CG3897-PA... 29 9.4
AE014296-2899|AAN11708.1| 976|Drosophila melanogaster CG3897-PD... 29 9.4
AE014296-2898|AAN11707.1| 976|Drosophila melanogaster CG3897-PB... 29 9.4
>AY051948-1|AAK93372.1| 382|Drosophila melanogaster LD42063p
protein.
Length = 382
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 296 TRAYEPEKALKKAEI*WKMNQNRKKTNSIKSQTYADSSLTIAVLSGDLTLNRK 454
T + K LKKA + K+ R +NS+ S+T + S+ T + + L RK
Sbjct: 307 TSEFRHYKTLKKAYLEVKLAHIRTTSNSLPSETSSASAKTFQAIKCVMMLKRK 359
>AJ243264-1|CAB53640.1| 1035|Drosophila melanogaster putative orphan
neurotransmittertransporter protein.
Length = 1035
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 544 RGAKSKIFFPQIWPFSSNFLSE 479
R + S+ +FP++W F SN L+E
Sbjct: 416 RNSFSRHYFPELWGFDSNLLAE 437
>AE014298-1163|AAF46360.3| 382|Drosophila melanogaster CG1636-PA
protein.
Length = 382
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 296 TRAYEPEKALKKAEI*WKMNQNRKKTNSIKSQTYADSSLTIAVLSGDLTLNRK 454
T + K LKKA + K+ R +NS+ S+T + S+ T + + L RK
Sbjct: 307 TSEFRHYKTLKKAYLEVKLAHIRTTSNSLPSETSSASAKTFQAIKCVMMLKRK 359
>AE014296-2901|AAN11709.1| 809|Drosophila melanogaster CG3897-PC,
isoform C protein.
Length = 809
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 544 RGAKSKIFFPQIWPFSSNFLSE 479
R + S+ +FP++W F SN L+E
Sbjct: 249 RNSFSRHYFPELWGFDSNLLAE 270
>AE014296-2900|AAF49348.2| 769|Drosophila melanogaster CG3897-PA,
isoform A protein.
Length = 769
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 544 RGAKSKIFFPQIWPFSSNFLSE 479
R + S+ +FP++W F SN L+E
Sbjct: 209 RNSFSRHYFPELWGFDSNLLAE 230
>AE014296-2899|AAN11708.1| 976|Drosophila melanogaster CG3897-PD,
isoform D protein.
Length = 976
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 544 RGAKSKIFFPQIWPFSSNFLSE 479
R + S+ +FP++W F SN L+E
Sbjct: 416 RNSFSRHYFPELWGFDSNLLAE 437
>AE014296-2898|AAN11707.1| 976|Drosophila melanogaster CG3897-PB,
isoform B protein.
Length = 976
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 544 RGAKSKIFFPQIWPFSSNFLSE 479
R + S+ +FP++W F SN L+E
Sbjct: 416 RNSFSRHYFPELWGFDSNLLAE 437
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,065,903
Number of Sequences: 53049
Number of extensions: 598159
Number of successful extensions: 1495
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1495
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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